Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB40CQ96S21 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RAB40CQ96S21 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.93■□□□□ 0.78
RAB40CQ96S21 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RAB40CQ96S21 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
RAB40CQ96S21 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RAB40CQ96S21 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.93■□□□□ 0.78
RAB40CQ96S21 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAB40CQ96S21 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RAB40CQ96S21 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB40CQ96S21 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.92■□□□□ 0.78
RAB40CQ96S21 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB40CQ96S21 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RAB40CQ96S21 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RAB40CQ96S21 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40CQ96S21 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40CQ96S21 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC19.91■□□□□ 0.78
RAB40CQ96S21 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40CQ96S21 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40CQ96S21 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.91■□□□□ 0.78
RAB40CQ96S21 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40CQ96S21 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.91■□□□□ 0.78
RAB40CQ96S21 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB40CQ96S21 AC142472.1-201ENST00000612013 1741 ntBASIC19.9■□□□□ 0.78
RAB40CQ96S21 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB40CQ96S21 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.9■□□□□ 0.78
RAB40CQ96S21 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.9■□□□□ 0.78
RAB40CQ96S21 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.9■□□□□ 0.78
RAB40CQ96S21 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB40CQ96S21 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RAB40CQ96S21 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB40CQ96S21 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB40CQ96S21 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB40CQ96S21 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.89■□□□□ 0.77
RAB40CQ96S21 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAB40CQ96S21 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC19.89■□□□□ 0.77
RAB40CQ96S21 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB40CQ96S21 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB40CQ96S21 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.88■□□□□ 0.77
RAB40CQ96S21 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC19.88■□□□□ 0.77
RAB40CQ96S21 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC19.88■□□□□ 0.77
RAB40CQ96S21 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RAB40CQ96S21 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB40CQ96S21 LINC00273-201ENST00000539813 1452 ntBASIC19.87■□□□□ 0.77
RAB40CQ96S21 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RAB40CQ96S21 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC19.87■□□□□ 0.77
RAB40CQ96S21 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB40CQ96S21 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB40CQ96S21 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.86■□□□□ 0.77
RAB40CQ96S21 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40CQ96S21 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40CQ96S21 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40CQ96S21 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40CQ96S21 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40CQ96S21 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40CQ96S21 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40CQ96S21 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40CQ96S21 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40CQ96S21 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40CQ96S21 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB40CQ96S21 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RAB40CQ96S21 ERN1-208ENST00000606895 2068 ntBASIC19.85■□□□□ 0.77
RAB40CQ96S21 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RAB40CQ96S21 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAB40CQ96S21 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB40CQ96S21 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB40CQ96S21 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB40CQ96S21 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC19.84■□□□□ 0.77
RAB40CQ96S21 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB40CQ96S21 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAB40CQ96S21 MIR762-201ENST00000390236 83 ntBASIC19.83■□□□□ 0.77
RAB40CQ96S21 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB40CQ96S21 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB40CQ96S21 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB40CQ96S21 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB40CQ96S21 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB40CQ96S21 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB40CQ96S21 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB40CQ96S21 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.81■□□□□ 0.76
RAB40CQ96S21 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB40CQ96S21 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RAB40CQ96S21 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB40CQ96S21 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAB40CQ96S21 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.8■□□□□ 0.76
RAB40CQ96S21 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAB40CQ96S21 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB40CQ96S21 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB40CQ96S21 AC108673.1-201ENST00000510422 1159 ntBASIC19.8■□□□□ 0.76
RAB40CQ96S21 SUZ12P1-203ENST00000578195 985 ntBASIC19.8■□□□□ 0.76
RAB40CQ96S21 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.8■□□□□ 0.76
RAB40CQ96S21 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB40CQ96S21 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAB40CQ96S21 AC142381.3-201ENST00000568208 1670 ntBASIC19.8■□□□□ 0.76
RAB40CQ96S21 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAB40CQ96S21 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB40CQ96S21 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.79■□□□□ 0.76
RAB40CQ96S21 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.79■□□□□ 0.76
RAB40CQ96S21 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC19.79■□□□□ 0.76
RAB40CQ96S21 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RAB40CQ96S21 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms