Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FOXRED1Q96CU9 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
FOXRED1Q96CU9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
FOXRED1Q96CU9 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
FOXRED1Q96CU9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
FOXRED1Q96CU9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
FOXRED1Q96CU9 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
FOXRED1Q96CU9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.33■■□□□ 1.01
FOXRED1Q96CU9 AC142472.1-201ENST00000612013 1741 ntBASIC21.33■■□□□ 1.01
FOXRED1Q96CU9 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
FOXRED1Q96CU9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
FOXRED1Q96CU9 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.33■■□□□ 1
FOXRED1Q96CU9 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
FOXRED1Q96CU9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
FOXRED1Q96CU9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.32■■□□□ 1
FOXRED1Q96CU9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
FOXRED1Q96CU9 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
FOXRED1Q96CU9 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
FOXRED1Q96CU9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
FOXRED1Q96CU9 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.31■■□□□ 1
FOXRED1Q96CU9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.31■■□□□ 1
FOXRED1Q96CU9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
FOXRED1Q96CU9 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXRED1Q96CU9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.3■■□□□ 1
FOXRED1Q96CU9 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
FOXRED1Q96CU9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.3■■□□□ 1
FOXRED1Q96CU9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.3■■□□□ 1
FOXRED1Q96CU9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXRED1Q96CU9 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
FOXRED1Q96CU9 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.3■■□□□ 1
FOXRED1Q96CU9 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC21.3■■□□□ 1
FOXRED1Q96CU9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.3■■□□□ 1
FOXRED1Q96CU9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.3■■□□□ 1
FOXRED1Q96CU9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
FOXRED1Q96CU9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
FOXRED1Q96CU9 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.29■■□□□ 1
FOXRED1Q96CU9 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.29■■□□□ 1
FOXRED1Q96CU9 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.29■■□□□ 1
FOXRED1Q96CU9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.29■■□□□ 1
FOXRED1Q96CU9 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.29■■□□□ 1
FOXRED1Q96CU9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.29■■□□□ 1
FOXRED1Q96CU9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.29■■□□□ 1
FOXRED1Q96CU9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.28■■□□□ 1
FOXRED1Q96CU9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.28■■□□□ 1
FOXRED1Q96CU9 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
FOXRED1Q96CU9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
FOXRED1Q96CU9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.27■■□□□ 1
FOXRED1Q96CU9 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXRED1Q96CU9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
FOXRED1Q96CU9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.27■■□□□ 1
FOXRED1Q96CU9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
FOXRED1Q96CU9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.27■■□□□ 1
FOXRED1Q96CU9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
FOXRED1Q96CU9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXRED1Q96CU9 AC110285.7-201ENST00000624417 1536 ntBASIC21.26■□□□□ 0.99
FOXRED1Q96CU9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXRED1Q96CU9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
FOXRED1Q96CU9 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
FOXRED1Q96CU9 WHAMMP3-201ENST00000611636 1609 ntBASIC21.26■□□□□ 0.99
FOXRED1Q96CU9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXRED1Q96CU9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.25■□□□□ 0.99
FOXRED1Q96CU9 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.25■□□□□ 0.99
FOXRED1Q96CU9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXRED1Q96CU9 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXRED1Q96CU9 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
FOXRED1Q96CU9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.25■□□□□ 0.99
FOXRED1Q96CU9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.24■□□□□ 0.99
FOXRED1Q96CU9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.24■□□□□ 0.99
FOXRED1Q96CU9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
FOXRED1Q96CU9 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXRED1Q96CU9 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.24■□□□□ 0.99
FOXRED1Q96CU9 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.24■□□□□ 0.99
FOXRED1Q96CU9 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.24■□□□□ 0.99
FOXRED1Q96CU9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXRED1Q96CU9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
FOXRED1Q96CU9 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXRED1Q96CU9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
FOXRED1Q96CU9 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FOXRED1Q96CU9 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FOXRED1Q96CU9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FOXRED1Q96CU9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXRED1Q96CU9 DUX4L29-201ENST00000425409 679 ntBASIC21.23■□□□□ 0.99
FOXRED1Q96CU9 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
FOXRED1Q96CU9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
FOXRED1Q96CU9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
FOXRED1Q96CU9 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.22■□□□□ 0.99
FOXRED1Q96CU9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
FOXRED1Q96CU9 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
FOXRED1Q96CU9 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.21■□□□□ 0.99
FOXRED1Q96CU9 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXRED1Q96CU9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXRED1Q96CU9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.21■□□□□ 0.99
FOXRED1Q96CU9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
FOXRED1Q96CU9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
FOXRED1Q96CU9 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.2■□□□□ 0.98
FOXRED1Q96CU9 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
FOXRED1Q96CU9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
FOXRED1Q96CU9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.2■□□□□ 0.98
FOXRED1Q96CU9 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.2■□□□□ 0.98
FOXRED1Q96CU9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms