Protein–RNA interactions for Protein: Q92947

GCDH, Glutaryl-CoA dehydrogenase, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCDHQ92947 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
GCDHQ92947 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.52■■□□□ 1.04
GCDHQ92947 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
GCDHQ92947 AC093323.1-202ENST00000635031 2045 ntBASIC21.51■■□□□ 1.03
GCDHQ92947 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
GCDHQ92947 AC016575.1-201ENST00000607026 382 ntBASIC21.5■■□□□ 1.03
GCDHQ92947 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.5■■□□□ 1.03
GCDHQ92947 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GCDHQ92947 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
GCDHQ92947 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.5■■□□□ 1.03
GCDHQ92947 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.49■■□□□ 1.03
GCDHQ92947 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
GCDHQ92947 MIR3648-2-201ENST00000581792 180 ntBASIC21.49■■□□□ 1.03
GCDHQ92947 MIR3648-1-201ENST00000615959 180 ntBASIC21.49■■□□□ 1.03
GCDHQ92947 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
GCDHQ92947 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GCDHQ92947 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.48■■□□□ 1.03
GCDHQ92947 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
GCDHQ92947 HSD17B1P1-201ENST00000590052 955 ntBASIC21.48■■□□□ 1.03
GCDHQ92947 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.48■■□□□ 1.03
GCDHQ92947 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
GCDHQ92947 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GCDHQ92947 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.48■■□□□ 1.03
GCDHQ92947 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
GCDHQ92947 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
GCDHQ92947 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.47■■□□□ 1.03
GCDHQ92947 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GCDHQ92947 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.47■■□□□ 1.03
GCDHQ92947 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GCDHQ92947 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.46■■□□□ 1.03
GCDHQ92947 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
GCDHQ92947 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
GCDHQ92947 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.46■■□□□ 1.03
GCDHQ92947 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
GCDHQ92947 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GCDHQ92947 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GCDHQ92947 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GCDHQ92947 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GCDHQ92947 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.45■■□□□ 1.02
GCDHQ92947 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.45■■□□□ 1.02
GCDHQ92947 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.45■■□□□ 1.02
GCDHQ92947 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
GCDHQ92947 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.45■■□□□ 1.02
GCDHQ92947 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
GCDHQ92947 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GCDHQ92947 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.44■■□□□ 1.02
GCDHQ92947 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GCDHQ92947 AC108673.1-201ENST00000510422 1159 ntBASIC21.44■■□□□ 1.02
GCDHQ92947 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.44■■□□□ 1.02
GCDHQ92947 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GCDHQ92947 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GCDHQ92947 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.43■■□□□ 1.02
GCDHQ92947 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.43■■□□□ 1.02
GCDHQ92947 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GCDHQ92947 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
GCDHQ92947 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
GCDHQ92947 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
GCDHQ92947 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
GCDHQ92947 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
GCDHQ92947 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
GCDHQ92947 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
GCDHQ92947 AC018358.1-201ENST00000631079 1402 ntBASIC21.41■■□□□ 1.02
GCDHQ92947 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.41■■□□□ 1.02
GCDHQ92947 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
GCDHQ92947 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
GCDHQ92947 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.41■■□□□ 1.02
GCDHQ92947 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
GCDHQ92947 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
GCDHQ92947 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GCDHQ92947 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
GCDHQ92947 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.4■■□□□ 1.02
GCDHQ92947 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
GCDHQ92947 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
GCDHQ92947 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
GCDHQ92947 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
GCDHQ92947 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
GCDHQ92947 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
GCDHQ92947 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.39■■□□□ 1.01
GCDHQ92947 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
GCDHQ92947 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
GCDHQ92947 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
GCDHQ92947 AC092803.2-201ENST00000564287 1899 ntBASIC21.39■■□□□ 1.01
GCDHQ92947 DUSP8P4-201ENST00000399538 1761 ntBASIC21.38■■□□□ 1.01
GCDHQ92947 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GCDHQ92947 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GCDHQ92947 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GCDHQ92947 DUX4L11-201ENST00000611504 1267 ntBASIC21.38■■□□□ 1.01
GCDHQ92947 DUX4L12-201ENST00000614593 1267 ntBASIC21.38■■□□□ 1.01
GCDHQ92947 DUX4L14-201ENST00000621227 1267 ntBASIC21.38■■□□□ 1.01
GCDHQ92947 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.38■■□□□ 1.01
GCDHQ92947 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
GCDHQ92947 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
GCDHQ92947 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GCDHQ92947 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
GCDHQ92947 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
GCDHQ92947 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GCDHQ92947 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
GCDHQ92947 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.37■■□□□ 1.01
GCDHQ92947 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
GCDHQ92947 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms