Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 BHLHE23-202ENST00000612929 1109 ntBASIC32.94■■■□□ 2.86
RAPGEF4Q8WZA2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC32.94■■■□□ 2.86
RAPGEF4Q8WZA2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
RAPGEF4Q8WZA2 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC32.92■■■□□ 2.86
RAPGEF4Q8WZA2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
RAPGEF4Q8WZA2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC32.91■■■□□ 2.86
RAPGEF4Q8WZA2 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC32.91■■■□□ 2.86
RAPGEF4Q8WZA2 AL451085.2-201ENST00000605085 799 ntBASIC32.91■■■□□ 2.86
RAPGEF4Q8WZA2 AL035685.1-201ENST00000636663 812 ntBASIC32.91■■■□□ 2.86
RAPGEF4Q8WZA2 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC32.9■■■□□ 2.86
RAPGEF4Q8WZA2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
RAPGEF4Q8WZA2 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC32.89■■■□□ 2.86
RAPGEF4Q8WZA2 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC32.89■■■□□ 2.86
RAPGEF4Q8WZA2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC32.89■■■□□ 2.86
RAPGEF4Q8WZA2 AC010980.1-201ENST00000587192 1142 ntBASIC32.89■■■□□ 2.86
RAPGEF4Q8WZA2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
RAPGEF4Q8WZA2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC32.88■■■□□ 2.85
RAPGEF4Q8WZA2 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC32.88■■■□□ 2.85
RAPGEF4Q8WZA2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC32.88■■■□□ 2.85
RAPGEF4Q8WZA2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
RAPGEF4Q8WZA2 AC074183.2-201ENST00000623112 922 ntBASIC32.87■■■□□ 2.85
RAPGEF4Q8WZA2 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
RAPGEF4Q8WZA2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC32.86■■■□□ 2.85
RAPGEF4Q8WZA2 MIR6765-201ENST00000614092 87 ntBASIC32.86■■■□□ 2.85
RAPGEF4Q8WZA2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
RAPGEF4Q8WZA2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC32.85■■■□□ 2.85
RAPGEF4Q8WZA2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC32.85■■■□□ 2.85
RAPGEF4Q8WZA2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC32.85■■■□□ 2.85
RAPGEF4Q8WZA2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
RAPGEF4Q8WZA2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
RAPGEF4Q8WZA2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
RAPGEF4Q8WZA2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC32.84■■■□□ 2.85
RAPGEF4Q8WZA2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC32.84■■■□□ 2.85
RAPGEF4Q8WZA2 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
RAPGEF4Q8WZA2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC32.83■■■□□ 2.85
RAPGEF4Q8WZA2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC32.83■■■□□ 2.85
RAPGEF4Q8WZA2 AC139795.1-202ENST00000500444 432 ntBASIC32.82■■■□□ 2.84
RAPGEF4Q8WZA2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
RAPGEF4Q8WZA2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC32.81■■■□□ 2.84
RAPGEF4Q8WZA2 KRT8P33-201ENST00000508125 1423 ntBASIC32.81■■■□□ 2.84
RAPGEF4Q8WZA2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
RAPGEF4Q8WZA2 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC32.81■■■□□ 2.84
RAPGEF4Q8WZA2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC32.8■■■□□ 2.84
RAPGEF4Q8WZA2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC32.8■■■□□ 2.84
RAPGEF4Q8WZA2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC32.79■■■□□ 2.84
RAPGEF4Q8WZA2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
RAPGEF4Q8WZA2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
RAPGEF4Q8WZA2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
RAPGEF4Q8WZA2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC32.79■■■□□ 2.84
RAPGEF4Q8WZA2 AC018755.3-202ENST00000596210 929 ntBASIC32.79■■■□□ 2.84
RAPGEF4Q8WZA2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC32.79■■■□□ 2.84
RAPGEF4Q8WZA2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
RAPGEF4Q8WZA2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
RAPGEF4Q8WZA2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
RAPGEF4Q8WZA2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC32.78■■■□□ 2.84
RAPGEF4Q8WZA2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
RAPGEF4Q8WZA2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC32.78■■■□□ 2.84
RAPGEF4Q8WZA2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC32.77■■■□□ 2.84
RAPGEF4Q8WZA2 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC32.77■■■□□ 2.84
RAPGEF4Q8WZA2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC32.77■■■□□ 2.84
RAPGEF4Q8WZA2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
RAPGEF4Q8WZA2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC32.77■■■□□ 2.84
RAPGEF4Q8WZA2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
RAPGEF4Q8WZA2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC32.77■■■□□ 2.84
RAPGEF4Q8WZA2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC32.77■■■□□ 2.84
RAPGEF4Q8WZA2 AL359504.2-201ENST00000605506 1601 ntBASIC32.77■■■□□ 2.84
RAPGEF4Q8WZA2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
RAPGEF4Q8WZA2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
RAPGEF4Q8WZA2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
RAPGEF4Q8WZA2 HYI-210ENST00000486909 905 ntTSL 5 BASIC32.76■■■□□ 2.83
RAPGEF4Q8WZA2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
RAPGEF4Q8WZA2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC32.75■■■□□ 2.83
RAPGEF4Q8WZA2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC32.75■■■□□ 2.83
RAPGEF4Q8WZA2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC32.75■■■□□ 2.83
RAPGEF4Q8WZA2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC32.74■■■□□ 2.83
RAPGEF4Q8WZA2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC32.74■■■□□ 2.83
RAPGEF4Q8WZA2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC32.73■■■□□ 2.83
RAPGEF4Q8WZA2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
RAPGEF4Q8WZA2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
RAPGEF4Q8WZA2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
RAPGEF4Q8WZA2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC32.73■■■□□ 2.83
RAPGEF4Q8WZA2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC32.73■■■□□ 2.83
RAPGEF4Q8WZA2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC32.72■■■□□ 2.83
RAPGEF4Q8WZA2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
RAPGEF4Q8WZA2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC32.71■■■□□ 2.83
RAPGEF4Q8WZA2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC32.7■■■□□ 2.83
RAPGEF4Q8WZA2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC32.7■■■□□ 2.83
RAPGEF4Q8WZA2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
RAPGEF4Q8WZA2 YBX1P4-201ENST00000392794 808 ntBASIC32.7■■■□□ 2.83
RAPGEF4Q8WZA2 AC103834.1-201ENST00000520383 144 ntBASIC32.7■■■□□ 2.83
RAPGEF4Q8WZA2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC32.7■■■□□ 2.83
RAPGEF4Q8WZA2 PVT1_1.1-201ENST00000615125 194 ntBASIC32.7■■■□□ 2.83
RAPGEF4Q8WZA2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.82
RAPGEF4Q8WZA2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
RAPGEF4Q8WZA2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC32.68■■■□□ 2.82
RAPGEF4Q8WZA2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
RAPGEF4Q8WZA2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC32.67■■■□□ 2.82
RAPGEF4Q8WZA2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
RAPGEF4Q8WZA2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC32.66■■■□□ 2.82
RAPGEF4Q8WZA2 AC009299.2-201ENST00000482477 511 ntBASIC32.66■■■□□ 2.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms