Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSMEM1Q8WWF3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SSMEM1Q8WWF3 AC060814.1-201ENST00000554326 538 ntBASIC20.32■□□□□ 0.84
SSMEM1Q8WWF3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.32■□□□□ 0.84
SSMEM1Q8WWF3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SSMEM1Q8WWF3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SSMEM1Q8WWF3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSMEM1Q8WWF3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SSMEM1Q8WWF3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSMEM1Q8WWF3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.31■□□□□ 0.84
SSMEM1Q8WWF3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.31■□□□□ 0.84
SSMEM1Q8WWF3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSMEM1Q8WWF3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSMEM1Q8WWF3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.3■□□□□ 0.84
SSMEM1Q8WWF3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSMEM1Q8WWF3 AC100797.4-201ENST00000631653 1827 ntBASIC20.3■□□□□ 0.84
SSMEM1Q8WWF3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
SSMEM1Q8WWF3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSMEM1Q8WWF3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SSMEM1Q8WWF3 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.3■□□□□ 0.84
SSMEM1Q8WWF3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSMEM1Q8WWF3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSMEM1Q8WWF3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSMEM1Q8WWF3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSMEM1Q8WWF3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.29■□□□□ 0.84
SSMEM1Q8WWF3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SSMEM1Q8WWF3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSMEM1Q8WWF3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSMEM1Q8WWF3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSMEM1Q8WWF3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SSMEM1Q8WWF3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SSMEM1Q8WWF3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSMEM1Q8WWF3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SSMEM1Q8WWF3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.28■□□□□ 0.84
SSMEM1Q8WWF3 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SSMEM1Q8WWF3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SSMEM1Q8WWF3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.27■□□□□ 0.84
SSMEM1Q8WWF3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SSMEM1Q8WWF3 BX255925.1-201ENST00000566954 1854 ntBASIC20.27■□□□□ 0.84
SSMEM1Q8WWF3 NTF6A-201ENST00000591175 560 ntBASIC20.27■□□□□ 0.84
SSMEM1Q8WWF3 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SSMEM1Q8WWF3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSMEM1Q8WWF3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSMEM1Q8WWF3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SSMEM1Q8WWF3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SSMEM1Q8WWF3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SSMEM1Q8WWF3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
SSMEM1Q8WWF3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSMEM1Q8WWF3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SSMEM1Q8WWF3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSMEM1Q8WWF3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSMEM1Q8WWF3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SSMEM1Q8WWF3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.24■□□□□ 0.83
SSMEM1Q8WWF3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SSMEM1Q8WWF3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SSMEM1Q8WWF3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.24■□□□□ 0.83
SSMEM1Q8WWF3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSMEM1Q8WWF3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.23■□□□□ 0.83
SSMEM1Q8WWF3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SSMEM1Q8WWF3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
SSMEM1Q8WWF3 AC092296.2-201ENST00000589470 999 ntBASIC20.23■□□□□ 0.83
SSMEM1Q8WWF3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSMEM1Q8WWF3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSMEM1Q8WWF3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.22■□□□□ 0.83
SSMEM1Q8WWF3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSMEM1Q8WWF3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.22■□□□□ 0.83
SSMEM1Q8WWF3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SSMEM1Q8WWF3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SSMEM1Q8WWF3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.21■□□□□ 0.83
SSMEM1Q8WWF3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SSMEM1Q8WWF3 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.21■□□□□ 0.83
SSMEM1Q8WWF3 ECEL1P2-201ENST00000461596 1295 ntBASIC20.21■□□□□ 0.83
SSMEM1Q8WWF3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.21■□□□□ 0.83
SSMEM1Q8WWF3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SSMEM1Q8WWF3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SSMEM1Q8WWF3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
SSMEM1Q8WWF3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SSMEM1Q8WWF3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSMEM1Q8WWF3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SSMEM1Q8WWF3 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.2■□□□□ 0.82
SSMEM1Q8WWF3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SSMEM1Q8WWF3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.2■□□□□ 0.82
SSMEM1Q8WWF3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.19■□□□□ 0.82
SSMEM1Q8WWF3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SSMEM1Q8WWF3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
SSMEM1Q8WWF3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
SSMEM1Q8WWF3 AC012354.3-201ENST00000623734 483 ntBASIC20.19■□□□□ 0.82
SSMEM1Q8WWF3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.19■□□□□ 0.82
SSMEM1Q8WWF3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
SSMEM1Q8WWF3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SSMEM1Q8WWF3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSMEM1Q8WWF3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC20.18■□□□□ 0.82
SSMEM1Q8WWF3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SSMEM1Q8WWF3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSMEM1Q8WWF3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.17■□□□□ 0.82
SSMEM1Q8WWF3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SSMEM1Q8WWF3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.17■□□□□ 0.82
SSMEM1Q8WWF3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SSMEM1Q8WWF3 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.17■□□□□ 0.82
SSMEM1Q8WWF3 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms