Protein–RNA interactions for Protein: Q8N9B8

RASGEF1A, Ras-GEF domain-containing family member 1A, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1AQ8N9B8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
RASGEF1AQ8N9B8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
RASGEF1AQ8N9B8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
RASGEF1AQ8N9B8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC24.49■■□□□ 1.51
RASGEF1AQ8N9B8 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
RASGEF1AQ8N9B8 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC24.48■■□□□ 1.51
RASGEF1AQ8N9B8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
RASGEF1AQ8N9B8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
RASGEF1AQ8N9B8 AL449106.1-201ENST00000608517 1980 ntBASIC24.47■■□□□ 1.51
RASGEF1AQ8N9B8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.47■■□□□ 1.51
RASGEF1AQ8N9B8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.46■■□□□ 1.51
RASGEF1AQ8N9B8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.46■■□□□ 1.51
RASGEF1AQ8N9B8 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
RASGEF1AQ8N9B8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RASGEF1AQ8N9B8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.46■■□□□ 1.51
RASGEF1AQ8N9B8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RASGEF1AQ8N9B8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RASGEF1AQ8N9B8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
RASGEF1AQ8N9B8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
RASGEF1AQ8N9B8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RASGEF1AQ8N9B8 AC092296.2-201ENST00000589470 999 ntBASIC24.44■■□□□ 1.5
RASGEF1AQ8N9B8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
RASGEF1AQ8N9B8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
RASGEF1AQ8N9B8 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
RASGEF1AQ8N9B8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RASGEF1AQ8N9B8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RASGEF1AQ8N9B8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RASGEF1AQ8N9B8 AL157400.5-201ENST00000507624 621 ntBASIC24.43■■□□□ 1.5
RASGEF1AQ8N9B8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RASGEF1AQ8N9B8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RASGEF1AQ8N9B8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RASGEF1AQ8N9B8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.42■■□□□ 1.5
RASGEF1AQ8N9B8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RASGEF1AQ8N9B8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
RASGEF1AQ8N9B8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
RASGEF1AQ8N9B8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RASGEF1AQ8N9B8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RASGEF1AQ8N9B8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.41■■□□□ 1.5
RASGEF1AQ8N9B8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC24.41■■□□□ 1.5
RASGEF1AQ8N9B8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
RASGEF1AQ8N9B8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RASGEF1AQ8N9B8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RASGEF1AQ8N9B8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RASGEF1AQ8N9B8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
RASGEF1AQ8N9B8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.39■■□□□ 1.5
RASGEF1AQ8N9B8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RASGEF1AQ8N9B8 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RASGEF1AQ8N9B8 RNF126P1-201ENST00000567452 1320 ntBASIC24.38■■□□□ 1.49
RASGEF1AQ8N9B8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.38■■□□□ 1.49
RASGEF1AQ8N9B8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.38■■□□□ 1.49
RASGEF1AQ8N9B8 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
RASGEF1AQ8N9B8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
RASGEF1AQ8N9B8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RASGEF1AQ8N9B8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
RASGEF1AQ8N9B8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.37■■□□□ 1.49
RASGEF1AQ8N9B8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RASGEF1AQ8N9B8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
RASGEF1AQ8N9B8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RASGEF1AQ8N9B8 ECEL1P2-201ENST00000461596 1295 ntBASIC24.36■■□□□ 1.49
RASGEF1AQ8N9B8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.36■■□□□ 1.49
RASGEF1AQ8N9B8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC24.36■■□□□ 1.49
RASGEF1AQ8N9B8 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RASGEF1AQ8N9B8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.36■■□□□ 1.49
RASGEF1AQ8N9B8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.35■■□□□ 1.49
RASGEF1AQ8N9B8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RASGEF1AQ8N9B8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RASGEF1AQ8N9B8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RASGEF1AQ8N9B8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
RASGEF1AQ8N9B8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RASGEF1AQ8N9B8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
RASGEF1AQ8N9B8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RASGEF1AQ8N9B8 AL359504.2-201ENST00000605506 1601 ntBASIC24.34■■□□□ 1.49
RASGEF1AQ8N9B8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.34■■□□□ 1.49
RASGEF1AQ8N9B8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RASGEF1AQ8N9B8 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RASGEF1AQ8N9B8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
RASGEF1AQ8N9B8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RASGEF1AQ8N9B8 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RASGEF1AQ8N9B8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
RASGEF1AQ8N9B8 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.33■■□□□ 1.48
RASGEF1AQ8N9B8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.32■■□□□ 1.48
RASGEF1AQ8N9B8 RARRES2P2-201ENST00000394842 485 ntBASIC24.32■■□□□ 1.48
RASGEF1AQ8N9B8 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.32■■□□□ 1.48
RASGEF1AQ8N9B8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
RASGEF1AQ8N9B8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
RASGEF1AQ8N9B8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
RASGEF1AQ8N9B8 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RASGEF1AQ8N9B8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
RASGEF1AQ8N9B8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RASGEF1AQ8N9B8 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
RASGEF1AQ8N9B8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RASGEF1AQ8N9B8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
RASGEF1AQ8N9B8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
RASGEF1AQ8N9B8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
RASGEF1AQ8N9B8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.29■■□□□ 1.48
RASGEF1AQ8N9B8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
RASGEF1AQ8N9B8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RASGEF1AQ8N9B8 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.29■■□□□ 1.48
RASGEF1AQ8N9B8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.29■■□□□ 1.48
RASGEF1AQ8N9B8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms