Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LINC00311Q8N616 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.17■□□□□ 0.82
LINC00311Q8N616 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LINC00311Q8N616 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINC00311Q8N616 MIR639-201ENST00000384974 98 ntBASIC20.16■□□□□ 0.82
LINC00311Q8N616 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
LINC00311Q8N616 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LINC00311Q8N616 AC142472.1-201ENST00000612013 1741 ntBASIC20.16■□□□□ 0.82
LINC00311Q8N616 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LINC00311Q8N616 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
LINC00311Q8N616 AP004609.3-201ENST00000610705 1884 ntBASIC20.15■□□□□ 0.82
LINC00311Q8N616 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LINC00311Q8N616 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LINC00311Q8N616 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LINC00311Q8N616 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC20.14■□□□□ 0.81
LINC00311Q8N616 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC20.14■□□□□ 0.81
LINC00311Q8N616 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
LINC00311Q8N616 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LINC00311Q8N616 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LINC00311Q8N616 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
LINC00311Q8N616 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC00311Q8N616 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC00311Q8N616 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LINC00311Q8N616 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LINC00311Q8N616 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LINC00311Q8N616 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LINC00311Q8N616 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LINC00311Q8N616 AC126177.7-201ENST00000547904 679 ntBASIC20.12■□□□□ 0.81
LINC00311Q8N616 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.12■□□□□ 0.81
LINC00311Q8N616 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
LINC00311Q8N616 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LINC00311Q8N616 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.12■□□□□ 0.81
LINC00311Q8N616 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LINC00311Q8N616 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.11■□□□□ 0.81
LINC00311Q8N616 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.11■□□□□ 0.81
LINC00311Q8N616 AL359258.2-201ENST00000564063 1566 ntBASIC20.11■□□□□ 0.81
LINC00311Q8N616 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LINC00311Q8N616 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINC00311Q8N616 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LINC00311Q8N616 MED25-210ENST00000612854 801 ntTSL 5 BASIC20.1■□□□□ 0.81
LINC00311Q8N616 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LINC00311Q8N616 MED25-214ENST00000622402 642 ntTSL 5 BASIC20.1■□□□□ 0.81
LINC00311Q8N616 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINC00311Q8N616 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.09■□□□□ 0.81
LINC00311Q8N616 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINC00311Q8N616 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.09■□□□□ 0.81
LINC00311Q8N616 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.09■□□□□ 0.81
LINC00311Q8N616 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.09■□□□□ 0.81
LINC00311Q8N616 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINC00311Q8N616 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LINC00311Q8N616 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
LINC00311Q8N616 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LINC00311Q8N616 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LINC00311Q8N616 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LINC00311Q8N616 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LINC00311Q8N616 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LINC00311Q8N616 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LINC00311Q8N616 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LINC00311Q8N616 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LINC00311Q8N616 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LINC00311Q8N616 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
LINC00311Q8N616 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LINC00311Q8N616 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINC00311Q8N616 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
LINC00311Q8N616 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC20.07■□□□□ 0.8
LINC00311Q8N616 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LINC00311Q8N616 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINC00311Q8N616 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC00311Q8N616 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.06■□□□□ 0.8
LINC00311Q8N616 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC00311Q8N616 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC00311Q8N616 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LINC00311Q8N616 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LINC00311Q8N616 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.05■□□□□ 0.8
LINC00311Q8N616 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
LINC00311Q8N616 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.05■□□□□ 0.8
LINC00311Q8N616 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LINC00311Q8N616 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LINC00311Q8N616 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.05■□□□□ 0.8
LINC00311Q8N616 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LINC00311Q8N616 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
LINC00311Q8N616 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.04■□□□□ 0.8
LINC00311Q8N616 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.04■□□□□ 0.8
LINC00311Q8N616 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.04■□□□□ 0.8
LINC00311Q8N616 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00311Q8N616 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00311Q8N616 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.03■□□□□ 0.8
LINC00311Q8N616 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00311Q8N616 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00311Q8N616 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.02■□□□□ 0.8
LINC00311Q8N616 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.02■□□□□ 0.8
LINC00311Q8N616 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00311Q8N616 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.02■□□□□ 0.8
LINC00311Q8N616 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.02■□□□□ 0.8
LINC00311Q8N616 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.02■□□□□ 0.8
LINC00311Q8N616 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
LINC00311Q8N616 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LINC00311Q8N616 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
LINC00311Q8N616 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LINC00311Q8N616 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms