Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 AC139795.1-202ENST00000500444 432 ntBASIC31.92■■■□□ 2.7
SMIM5Q71RC9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC31.92■■■□□ 2.7
SMIM5Q71RC9 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.92■■■□□ 2.7
SMIM5Q71RC9 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
SMIM5Q71RC9 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC31.91■■■□□ 2.7
SMIM5Q71RC9 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
SMIM5Q71RC9 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SMIM5Q71RC9 MIR6765-201ENST00000614092 87 ntBASIC31.9■■■□□ 2.7
SMIM5Q71RC9 ST7-AS1-201ENST00000456775 1889 ntBASIC31.89■■■□□ 2.7
SMIM5Q71RC9 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
SMIM5Q71RC9 YBX1P4-201ENST00000392794 808 ntBASIC31.89■■■□□ 2.7
SMIM5Q71RC9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
SMIM5Q71RC9 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.89■■■□□ 2.69
SMIM5Q71RC9 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
SMIM5Q71RC9 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC31.88■■■□□ 2.69
SMIM5Q71RC9 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
SMIM5Q71RC9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
SMIM5Q71RC9 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
SMIM5Q71RC9 AC074183.2-201ENST00000623112 922 ntBASIC31.87■■■□□ 2.69
SMIM5Q71RC9 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC31.87■■■□□ 2.69
SMIM5Q71RC9 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
SMIM5Q71RC9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC31.86■■■□□ 2.69
SMIM5Q71RC9 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SMIM5Q71RC9 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SMIM5Q71RC9 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SMIM5Q71RC9 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC31.85■■■□□ 2.69
SMIM5Q71RC9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC31.85■■■□□ 2.69
SMIM5Q71RC9 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
SMIM5Q71RC9 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC31.84■■■□□ 2.69
SMIM5Q71RC9 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
SMIM5Q71RC9 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
SMIM5Q71RC9 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC31.84■■■□□ 2.69
SMIM5Q71RC9 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SMIM5Q71RC9 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SMIM5Q71RC9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC31.83■■■□□ 2.69
SMIM5Q71RC9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.83■■■□□ 2.69
SMIM5Q71RC9 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.83■■■□□ 2.69
SMIM5Q71RC9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC31.83■■■□□ 2.69
SMIM5Q71RC9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.83■■■□□ 2.69
SMIM5Q71RC9 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.68
SMIM5Q71RC9 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
SMIM5Q71RC9 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SMIM5Q71RC9 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.82■■■□□ 2.68
SMIM5Q71RC9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.81■■■□□ 2.68
SMIM5Q71RC9 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
SMIM5Q71RC9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC31.81■■■□□ 2.68
SMIM5Q71RC9 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
SMIM5Q71RC9 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
SMIM5Q71RC9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC31.8■■■□□ 2.68
SMIM5Q71RC9 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SMIM5Q71RC9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SMIM5Q71RC9 AC103724.3-201ENST00000564481 992 ntBASIC31.8■■■□□ 2.68
SMIM5Q71RC9 AP004833.2-201ENST00000532228 1454 ntBASIC31.78■■■□□ 2.68
SMIM5Q71RC9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC31.78■■■□□ 2.68
SMIM5Q71RC9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC31.78■■■□□ 2.68
SMIM5Q71RC9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC31.78■■■□□ 2.68
SMIM5Q71RC9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC31.78■■■□□ 2.68
SMIM5Q71RC9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31.77■■■□□ 2.68
SMIM5Q71RC9 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.76■■■□□ 2.68
SMIM5Q71RC9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
SMIM5Q71RC9 AL356441.2-201ENST00000443009 864 ntBASIC31.76■■■□□ 2.67
SMIM5Q71RC9 MIR4508-201ENST00000584178 70 ntBASIC31.76■■■□□ 2.67
SMIM5Q71RC9 AC018755.3-202ENST00000596210 929 ntBASIC31.76■■■□□ 2.67
SMIM5Q71RC9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC31.76■■■□□ 2.67
SMIM5Q71RC9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC31.75■■■□□ 2.67
SMIM5Q71RC9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
SMIM5Q71RC9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC31.75■■■□□ 2.67
SMIM5Q71RC9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SMIM5Q71RC9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SMIM5Q71RC9 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
SMIM5Q71RC9 MIR3960-201ENST00000583311 91 ntBASIC31.74■■■□□ 2.67
SMIM5Q71RC9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
SMIM5Q71RC9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
SMIM5Q71RC9 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
SMIM5Q71RC9 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.72■■■□□ 2.67
SMIM5Q71RC9 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.72■■■□□ 2.67
SMIM5Q71RC9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.72■■■□□ 2.67
SMIM5Q71RC9 IDNK-201ENST00000376417 511 ntTSL 5 BASIC31.72■■■□□ 2.67
SMIM5Q71RC9 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SMIM5Q71RC9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC31.72■■■□□ 2.67
SMIM5Q71RC9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.71■■■□□ 2.67
SMIM5Q71RC9 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.71■■■□□ 2.67
SMIM5Q71RC9 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC31.71■■■□□ 2.67
SMIM5Q71RC9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC31.71■■■□□ 2.67
SMIM5Q71RC9 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC31.71■■■□□ 2.67
SMIM5Q71RC9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
SMIM5Q71RC9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
SMIM5Q71RC9 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SMIM5Q71RC9 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC31.69■■■□□ 2.66
SMIM5Q71RC9 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC31.69■■■□□ 2.66
SMIM5Q71RC9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC31.69■■■□□ 2.66
SMIM5Q71RC9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
SMIM5Q71RC9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.69■■■□□ 2.66
SMIM5Q71RC9 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC31.69■■■□□ 2.66
SMIM5Q71RC9 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SMIM5Q71RC9 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SMIM5Q71RC9 AL031848.2-201ENST00000607670 837 ntBASIC31.68■■■□□ 2.66
SMIM5Q71RC9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SMIM5Q71RC9 ABCB10P3-201ENST00000561950 2166 ntBASIC31.67■■■□□ 2.66
SMIM5Q71RC9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms