Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC31.81■■■□□ 2.68
CCDC30Q5VVM6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
CCDC30Q5VVM6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC31.81■■■□□ 2.68
CCDC30Q5VVM6 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CCDC30Q5VVM6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.8■■■□□ 2.68
CCDC30Q5VVM6 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
CCDC30Q5VVM6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
CCDC30Q5VVM6 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.79■■■□□ 2.68
CCDC30Q5VVM6 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC31.79■■■□□ 2.68
CCDC30Q5VVM6 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC31.78■■■□□ 2.68
CCDC30Q5VVM6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
CCDC30Q5VVM6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.78■■■□□ 2.68
CCDC30Q5VVM6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CCDC30Q5VVM6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC31.78■■■□□ 2.68
CCDC30Q5VVM6 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CCDC30Q5VVM6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
CCDC30Q5VVM6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC31.77■■■□□ 2.68
CCDC30Q5VVM6 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
CCDC30Q5VVM6 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CCDC30Q5VVM6 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
CCDC30Q5VVM6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
CCDC30Q5VVM6 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC30Q5VVM6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC31.75■■■□□ 2.67
CCDC30Q5VVM6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
CCDC30Q5VVM6 SMPD5-203ENST00000639008 1464 ntBASIC31.74■■■□□ 2.67
CCDC30Q5VVM6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC31.74■■■□□ 2.67
CCDC30Q5VVM6 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC31.74■■■□□ 2.67
CCDC30Q5VVM6 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.74■■■□□ 2.67
CCDC30Q5VVM6 AC025884.2-201ENST00000553429 711 ntBASIC31.73■■■□□ 2.67
CCDC30Q5VVM6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.73■■■□□ 2.67
CCDC30Q5VVM6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC31.73■■■□□ 2.67
CCDC30Q5VVM6 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC30Q5VVM6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
CCDC30Q5VVM6 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC30Q5VVM6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CCDC30Q5VVM6 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CCDC30Q5VVM6 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.7■■■□□ 2.67
CCDC30Q5VVM6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.67
CCDC30Q5VVM6 AL449106.1-201ENST00000608517 1980 ntBASIC31.7■■■□□ 2.66
CCDC30Q5VVM6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC31.7■■■□□ 2.66
CCDC30Q5VVM6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.69■■■□□ 2.66
CCDC30Q5VVM6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.69■■■□□ 2.66
CCDC30Q5VVM6 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CCDC30Q5VVM6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
CCDC30Q5VVM6 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC31.68■■■□□ 2.66
CCDC30Q5VVM6 AC007029.1-201ENST00000604183 313 ntBASIC31.68■■■□□ 2.66
CCDC30Q5VVM6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC31.68■■■□□ 2.66
CCDC30Q5VVM6 AL359504.2-201ENST00000605506 1601 ntBASIC31.67■■■□□ 2.66
CCDC30Q5VVM6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC31.67■■■□□ 2.66
CCDC30Q5VVM6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC31.67■■■□□ 2.66
CCDC30Q5VVM6 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CCDC30Q5VVM6 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC31.65■■■□□ 2.66
CCDC30Q5VVM6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
CCDC30Q5VVM6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC31.65■■■□□ 2.66
CCDC30Q5VVM6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC31.65■■■□□ 2.66
CCDC30Q5VVM6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC31.65■■■□□ 2.66
CCDC30Q5VVM6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CCDC30Q5VVM6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC31.63■■■□□ 2.65
CCDC30Q5VVM6 NTF6A-201ENST00000591175 560 ntBASIC31.63■■■□□ 2.65
CCDC30Q5VVM6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC31.63■■■□□ 2.65
CCDC30Q5VVM6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CCDC30Q5VVM6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC30Q5VVM6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CCDC30Q5VVM6 PFN2-211ENST00000489155 636 ntTSL 4 BASIC31.61■■■□□ 2.65
CCDC30Q5VVM6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
CCDC30Q5VVM6 U85056.1-201ENST00000616429 682 ntBASIC31.61■■■□□ 2.65
CCDC30Q5VVM6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC31.61■■■□□ 2.65
CCDC30Q5VVM6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CCDC30Q5VVM6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CCDC30Q5VVM6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
CCDC30Q5VVM6 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.59■■■□□ 2.65
CCDC30Q5VVM6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
CCDC30Q5VVM6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
CCDC30Q5VVM6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC31.58■■■□□ 2.65
CCDC30Q5VVM6 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
CCDC30Q5VVM6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC30Q5VVM6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
CCDC30Q5VVM6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC30Q5VVM6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC30Q5VVM6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC30Q5VVM6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
CCDC30Q5VVM6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CCDC30Q5VVM6 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC31.56■■■□□ 2.64
CCDC30Q5VVM6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
CCDC30Q5VVM6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC31.56■■■□□ 2.64
CCDC30Q5VVM6 RP9P-202ENST00000450133 1212 ntBASIC31.56■■■□□ 2.64
CCDC30Q5VVM6 MIR3960-201ENST00000583311 91 ntBASIC31.56■■■□□ 2.64
CCDC30Q5VVM6 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
CCDC30Q5VVM6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
CCDC30Q5VVM6 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.55■■■□□ 2.64
CCDC30Q5VVM6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC31.55■■■□□ 2.64
CCDC30Q5VVM6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
CCDC30Q5VVM6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CCDC30Q5VVM6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC30Q5VVM6 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC30Q5VVM6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CCDC30Q5VVM6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC31.53■■■□□ 2.64
CCDC30Q5VVM6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC31.53■■■□□ 2.64
CCDC30Q5VVM6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC31.53■■■□□ 2.64
CCDC30Q5VVM6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.53■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms