Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CLDN6P56747 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24■■□□□ 1.43
CLDN6P56747 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.99■■□□□ 1.43
CLDN6P56747 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLDN6P56747 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLDN6P56747 ST7-AS1-201ENST00000456775 1889 ntBASIC23.99■■□□□ 1.43
CLDN6P56747 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLDN6P56747 AC131212.1-201ENST00000613771 668 ntBASIC23.99■■□□□ 1.43
CLDN6P56747 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLDN6P56747 AC139795.1-202ENST00000500444 432 ntBASIC23.98■■□□□ 1.43
CLDN6P56747 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
CLDN6P56747 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.98■■□□□ 1.43
CLDN6P56747 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLDN6P56747 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.97■■□□□ 1.43
CLDN6P56747 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.97■■□□□ 1.43
CLDN6P56747 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC23.97■■□□□ 1.43
CLDN6P56747 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CLDN6P56747 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.96■■□□□ 1.43
CLDN6P56747 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLDN6P56747 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
CLDN6P56747 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CLDN6P56747 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLDN6P56747 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.96■■□□□ 1.43
CLDN6P56747 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
CLDN6P56747 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CLDN6P56747 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CLDN6P56747 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CLDN6P56747 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CLDN6P56747 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CLDN6P56747 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CLDN6P56747 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CLDN6P56747 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CLDN6P56747 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CLDN6P56747 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CLDN6P56747 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.94■■□□□ 1.42
CLDN6P56747 AC019069.1-201ENST00000610008 1333 ntBASIC23.93■■□□□ 1.42
CLDN6P56747 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
CLDN6P56747 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CLDN6P56747 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CLDN6P56747 THA1P-201ENST00000590384 1145 ntBASIC23.93■■□□□ 1.42
CLDN6P56747 MIR6765-201ENST00000614092 87 ntBASIC23.93■■□□□ 1.42
CLDN6P56747 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLDN6P56747 YBX1P4-201ENST00000392794 808 ntBASIC23.92■■□□□ 1.42
CLDN6P56747 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.92■■□□□ 1.42
CLDN6P56747 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLDN6P56747 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
CLDN6P56747 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.92■■□□□ 1.42
CLDN6P56747 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CLDN6P56747 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLDN6P56747 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.91■■□□□ 1.42
CLDN6P56747 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CLDN6P56747 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.91■■□□□ 1.42
CLDN6P56747 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC23.91■■□□□ 1.42
CLDN6P56747 AP004833.2-201ENST00000532228 1454 ntBASIC23.91■■□□□ 1.42
CLDN6P56747 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.9■■□□□ 1.42
CLDN6P56747 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.9■■□□□ 1.42
CLDN6P56747 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
CLDN6P56747 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.89■■□□□ 1.42
CLDN6P56747 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
CLDN6P56747 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.89■■□□□ 1.41
CLDN6P56747 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
CLDN6P56747 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC23.89■■□□□ 1.41
CLDN6P56747 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.89■■□□□ 1.41
CLDN6P56747 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
CLDN6P56747 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
CLDN6P56747 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLDN6P56747 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.88■■□□□ 1.41
CLDN6P56747 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.88■■□□□ 1.41
CLDN6P56747 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
CLDN6P56747 AC074183.2-201ENST00000623112 922 ntBASIC23.88■■□□□ 1.41
CLDN6P56747 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CLDN6P56747 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CLDN6P56747 GUSBP5-201ENST00000418136 578 ntBASIC23.87■■□□□ 1.41
CLDN6P56747 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.87■■□□□ 1.41
CLDN6P56747 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.87■■□□□ 1.41
CLDN6P56747 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CLDN6P56747 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.86■■□□□ 1.41
CLDN6P56747 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CLDN6P56747 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
CLDN6P56747 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.85■■□□□ 1.41
CLDN6P56747 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.85■■□□□ 1.41
CLDN6P56747 MIR3960-201ENST00000583311 91 ntBASIC23.85■■□□□ 1.41
CLDN6P56747 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.85■■□□□ 1.41
CLDN6P56747 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLDN6P56747 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLDN6P56747 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.84■■□□□ 1.41
CLDN6P56747 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.84■■□□□ 1.41
CLDN6P56747 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.84■■□□□ 1.41
CLDN6P56747 AC018755.3-202ENST00000596210 929 ntBASIC23.84■■□□□ 1.41
CLDN6P56747 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.84■■□□□ 1.41
CLDN6P56747 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CLDN6P56747 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLDN6P56747 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
CLDN6P56747 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CLDN6P56747 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CLDN6P56747 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CLDN6P56747 ABCB10P3-201ENST00000561950 2166 ntBASIC23.82■■□□□ 1.4
CLDN6P56747 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CLDN6P56747 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC23.82■■□□□ 1.4
CLDN6P56747 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms