Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC26.64■■□□□ 1.86
RB1P06400 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
RB1P06400 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
RB1P06400 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RB1P06400 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.63■■□□□ 1.85
RB1P06400 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC26.63■■□□□ 1.85
RB1P06400 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RB1P06400 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RB1P06400 MIR4508-201ENST00000584178 70 ntBASIC26.63■■□□□ 1.85
RB1P06400 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.63■■□□□ 1.85
RB1P06400 ST7-AS1-201ENST00000456775 1889 ntBASIC26.63■■□□□ 1.85
RB1P06400 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
RB1P06400 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RB1P06400 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RB1P06400 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RB1P06400 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26.62■■□□□ 1.85
RB1P06400 PVT1_1.1-201ENST00000615125 194 ntBASIC26.62■■□□□ 1.85
RB1P06400 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RB1P06400 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC26.61■■□□□ 1.85
RB1P06400 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC26.61■■□□□ 1.85
RB1P06400 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.61■■□□□ 1.85
RB1P06400 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RB1P06400 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RB1P06400 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RB1P06400 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
RB1P06400 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RB1P06400 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.59■■□□□ 1.85
RB1P06400 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RB1P06400 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.59■■□□□ 1.85
RB1P06400 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC26.59■■□□□ 1.85
RB1P06400 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.58■■□□□ 1.85
RB1P06400 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
RB1P06400 GUSBP5-201ENST00000418136 578 ntBASIC26.58■■□□□ 1.85
RB1P06400 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.58■■□□□ 1.85
RB1P06400 AC019069.1-201ENST00000610008 1333 ntBASIC26.58■■□□□ 1.85
RB1P06400 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
RB1P06400 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC26.57■■□□□ 1.84
RB1P06400 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.57■■□□□ 1.84
RB1P06400 AC131212.1-201ENST00000613771 668 ntBASIC26.57■■□□□ 1.84
RB1P06400 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
RB1P06400 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.56■■□□□ 1.84
RB1P06400 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RB1P06400 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.56■■□□□ 1.84
RB1P06400 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
RB1P06400 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
RB1P06400 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
RB1P06400 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
RB1P06400 MTURN-203ENST00000409688 843 ntTSL 2 BASIC26.55■■□□□ 1.84
RB1P06400 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
RB1P06400 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
RB1P06400 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.54■■□□□ 1.84
RB1P06400 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RB1P06400 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.54■■□□□ 1.84
RB1P06400 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
RB1P06400 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RB1P06400 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
RB1P06400 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
RB1P06400 THA1P-201ENST00000590384 1145 ntBASIC26.53■■□□□ 1.84
RB1P06400 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
RB1P06400 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
RB1P06400 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
RB1P06400 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
RB1P06400 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.52■■□□□ 1.84
RB1P06400 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.84
RB1P06400 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
RB1P06400 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RB1P06400 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
RB1P06400 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RB1P06400 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RB1P06400 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RB1P06400 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RB1P06400 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RB1P06400 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
RB1P06400 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RB1P06400 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
RB1P06400 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.5■■□□□ 1.83
RB1P06400 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.49■■□□□ 1.83
RB1P06400 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RB1P06400 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
RB1P06400 PRTG-204ENST00000561292 833 ntTSL 3 BASIC26.48■■□□□ 1.83
RB1P06400 AP002414.2-202ENST00000590929 1450 ntBASIC26.48■■□□□ 1.83
RB1P06400 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.48■■□□□ 1.83
RB1P06400 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
RB1P06400 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
RB1P06400 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.47■■□□□ 1.83
RB1P06400 AC103724.3-201ENST00000564481 992 ntBASIC26.47■■□□□ 1.83
RB1P06400 AL031848.2-201ENST00000607670 837 ntBASIC26.47■■□□□ 1.83
RB1P06400 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RB1P06400 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.46■■□□□ 1.83
RB1P06400 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
RB1P06400 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.46■■□□□ 1.83
RB1P06400 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
RB1P06400 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RB1P06400 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
RB1P06400 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.45■■□□□ 1.82
RB1P06400 AC019171.1-201ENST00000601251 1056 ntBASIC26.45■■□□□ 1.82
RB1P06400 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RB1P06400 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC26.45■■□□□ 1.82
RB1P06400 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RB1P06400 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms