Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 MTURN-203ENST00000409688 843 ntTSL 2 BASIC33.43■■■□□ 2.94
COL5A2P05997 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC33.43■■■□□ 2.94
COL5A2P05997 MIR3960-201ENST00000583311 91 ntBASIC33.43■■■□□ 2.94
COL5A2P05997 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC33.42■■■□□ 2.94
COL5A2P05997 AC139795.1-202ENST00000500444 432 ntBASIC33.42■■■□□ 2.94
COL5A2P05997 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC33.42■■■□□ 2.94
COL5A2P05997 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC33.41■■■□□ 2.94
COL5A2P05997 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC33.41■■■□□ 2.94
COL5A2P05997 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
COL5A2P05997 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC33.39■■■□□ 2.94
COL5A2P05997 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC33.39■■■□□ 2.94
COL5A2P05997 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC33.39■■■□□ 2.94
COL5A2P05997 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC33.39■■■□□ 2.94
COL5A2P05997 MIR4508-201ENST00000584178 70 ntBASIC33.39■■■□□ 2.94
COL5A2P05997 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC33.39■■■□□ 2.94
COL5A2P05997 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC33.39■■■□□ 2.94
COL5A2P05997 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
COL5A2P05997 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC33.38■■■□□ 2.93
COL5A2P05997 AC131212.1-201ENST00000613771 668 ntBASIC33.38■■■□□ 2.93
COL5A2P05997 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC33.37■■■□□ 2.93
COL5A2P05997 OR2A1-AS1-204ENST00000470435 602 ntBASIC33.37■■■□□ 2.93
COL5A2P05997 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC33.37■■■□□ 2.93
COL5A2P05997 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
COL5A2P05997 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
COL5A2P05997 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
COL5A2P05997 YBX1P4-201ENST00000392794 808 ntBASIC33.37■■■□□ 2.93
COL5A2P05997 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC33.36■■■□□ 2.93
COL5A2P05997 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
COL5A2P05997 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
COL5A2P05997 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
COL5A2P05997 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC33.35■■■□□ 2.93
COL5A2P05997 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
COL5A2P05997 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
COL5A2P05997 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC33.34■■■□□ 2.93
COL5A2P05997 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC33.33■■■□□ 2.93
COL5A2P05997 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC33.33■■■□□ 2.93
COL5A2P05997 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC33.33■■■□□ 2.93
COL5A2P05997 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
COL5A2P05997 THA1P-201ENST00000590384 1145 ntBASIC33.33■■■□□ 2.93
COL5A2P05997 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC33.33■■■□□ 2.93
COL5A2P05997 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC33.33■■■□□ 2.93
COL5A2P05997 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC33.33■■■□□ 2.93
COL5A2P05997 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC33.33■■■□□ 2.93
COL5A2P05997 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
COL5A2P05997 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC33.32■■■□□ 2.92
COL5A2P05997 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC33.31■■■□□ 2.92
COL5A2P05997 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC33.31■■■□□ 2.92
COL5A2P05997 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC33.31■■■□□ 2.92
COL5A2P05997 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC33.31■■■□□ 2.92
COL5A2P05997 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
COL5A2P05997 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
COL5A2P05997 HYI-210ENST00000486909 905 ntTSL 5 BASIC33.31■■■□□ 2.92
COL5A2P05997 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC33.3■■■□□ 2.92
COL5A2P05997 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC33.29■■■□□ 2.92
COL5A2P05997 AC103724.3-201ENST00000564481 992 ntBASIC33.29■■■□□ 2.92
COL5A2P05997 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
COL5A2P05997 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC33.28■■■□□ 2.92
COL5A2P05997 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC33.28■■■□□ 2.92
COL5A2P05997 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC33.27■■■□□ 2.92
COL5A2P05997 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC33.27■■■□□ 2.92
COL5A2P05997 IDNK-203ENST00000405990 629 ntTSL 2 BASIC33.27■■■□□ 2.92
COL5A2P05997 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC33.27■■■□□ 2.92
COL5A2P05997 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
COL5A2P05997 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC33.27■■■□□ 2.92
COL5A2P05997 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC33.26■■■□□ 2.92
COL5A2P05997 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC33.26■■■□□ 2.92
COL5A2P05997 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC33.25■■■□□ 2.91
COL5A2P05997 PRTG-204ENST00000561292 833 ntTSL 3 BASIC33.25■■■□□ 2.91
COL5A2P05997 IDNK-201ENST00000376417 511 ntTSL 5 BASIC33.25■■■□□ 2.91
COL5A2P05997 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
COL5A2P05997 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC33.24■■■□□ 2.91
COL5A2P05997 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC33.24■■■□□ 2.91
COL5A2P05997 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC33.23■■■□□ 2.91
COL5A2P05997 AC018755.3-202ENST00000596210 929 ntBASIC33.23■■■□□ 2.91
COL5A2P05997 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
COL5A2P05997 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC33.22■■■□□ 2.91
COL5A2P05997 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
COL5A2P05997 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC33.22■■■□□ 2.91
COL5A2P05997 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC33.22■■■□□ 2.91
COL5A2P05997 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
COL5A2P05997 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC33.21■■■□□ 2.91
COL5A2P05997 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
COL5A2P05997 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
COL5A2P05997 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC33.2■■■□□ 2.91
COL5A2P05997 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
COL5A2P05997 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.9
COL5A2P05997 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC33.2■■■□□ 2.9
COL5A2P05997 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC33.19■■■□□ 2.9
COL5A2P05997 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
COL5A2P05997 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC33.18■■■□□ 2.9
COL5A2P05997 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC33.18■■■□□ 2.9
COL5A2P05997 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC33.18■■■□□ 2.9
COL5A2P05997 AL356441.2-201ENST00000443009 864 ntBASIC33.18■■■□□ 2.9
COL5A2P05997 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC33.18■■■□□ 2.9
COL5A2P05997 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC33.18■■■□□ 2.9
COL5A2P05997 AL031848.2-201ENST00000607670 837 ntBASIC33.18■■■□□ 2.9
COL5A2P05997 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC33.17■■■□□ 2.9
COL5A2P05997 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC33.17■■■□□ 2.9
COL5A2P05997 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC33.16■■■□□ 2.9
COL5A2P05997 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC33.15■■■□□ 2.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms