Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CHGBP05060 AL449106.1-201ENST00000608517 1980 ntBASIC30.03■■■□□ 2.4
CHGBP05060 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CHGBP05060 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC30.02■■■□□ 2.4
CHGBP05060 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC30.02■■■□□ 2.4
CHGBP05060 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC30.01■■■□□ 2.4
CHGBP05060 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CHGBP05060 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC30.01■■■□□ 2.39
CHGBP05060 MOB2-207ENST00000614710 705 ntTSL 5 BASIC30.01■■■□□ 2.39
CHGBP05060 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
CHGBP05060 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC30■■■□□ 2.39
CHGBP05060 BRD4-212ENST00000630599 726 ntTSL 2 BASIC30■■■□□ 2.39
CHGBP05060 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CHGBP05060 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
CHGBP05060 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
CHGBP05060 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CHGBP05060 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CHGBP05060 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CHGBP05060 WHAMMP3-201ENST00000611636 1609 ntBASIC29.98■■■□□ 2.39
CHGBP05060 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.98■■■□□ 2.39
CHGBP05060 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
CHGBP05060 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC29.97■■■□□ 2.39
CHGBP05060 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC29.97■■■□□ 2.39
CHGBP05060 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
CHGBP05060 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
CHGBP05060 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC29.96■■■□□ 2.39
CHGBP05060 AC092296.2-201ENST00000589470 999 ntBASIC29.96■■■□□ 2.39
CHGBP05060 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CHGBP05060 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
CHGBP05060 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
CHGBP05060 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC29.95■■■□□ 2.39
CHGBP05060 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
CHGBP05060 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC29.95■■■□□ 2.38
CHGBP05060 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC29.94■■■□□ 2.38
CHGBP05060 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
CHGBP05060 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
CHGBP05060 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CHGBP05060 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CHGBP05060 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC29.93■■■□□ 2.38
CHGBP05060 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
CHGBP05060 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
CHGBP05060 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CHGBP05060 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
CHGBP05060 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC29.93■■■□□ 2.38
CHGBP05060 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
CHGBP05060 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CHGBP05060 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC29.92■■■□□ 2.38
CHGBP05060 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
CHGBP05060 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
CHGBP05060 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC29.91■■■□□ 2.38
CHGBP05060 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC29.91■■■□□ 2.38
CHGBP05060 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.9■■■□□ 2.38
CHGBP05060 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC29.9■■■□□ 2.38
CHGBP05060 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC29.89■■■□□ 2.38
CHGBP05060 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CHGBP05060 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC29.89■■■□□ 2.38
CHGBP05060 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
CHGBP05060 RARRES2P2-201ENST00000394842 485 ntBASIC29.89■■■□□ 2.38
CHGBP05060 SHF-208ENST00000560734 1731 ntTSL 3 BASIC29.88■■■□□ 2.37
CHGBP05060 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
CHGBP05060 RNF126P1-201ENST00000567452 1320 ntBASIC29.88■■■□□ 2.37
CHGBP05060 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CHGBP05060 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC29.87■■■□□ 2.37
CHGBP05060 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC29.87■■■□□ 2.37
CHGBP05060 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC29.87■■■□□ 2.37
CHGBP05060 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC29.86■■■□□ 2.37
CHGBP05060 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
CHGBP05060 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
CHGBP05060 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CHGBP05060 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC29.86■■■□□ 2.37
CHGBP05060 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
CHGBP05060 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC29.85■■■□□ 2.37
CHGBP05060 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC29.85■■■□□ 2.37
CHGBP05060 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CHGBP05060 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC29.84■■■□□ 2.37
CHGBP05060 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CHGBP05060 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC29.83■■■□□ 2.37
CHGBP05060 AL359504.2-201ENST00000605506 1601 ntBASIC29.83■■■□□ 2.37
CHGBP05060 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CHGBP05060 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CHGBP05060 PKM-203ENST00000389093 2279 ntTSL 5 BASIC29.83■■■□□ 2.37
CHGBP05060 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CHGBP05060 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CHGBP05060 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC29.82■■■□□ 2.36
CHGBP05060 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC29.82■■■□□ 2.36
CHGBP05060 AC126177.7-201ENST00000547904 679 ntBASIC29.81■■■□□ 2.36
CHGBP05060 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
CHGBP05060 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC29.8■■■□□ 2.36
CHGBP05060 AL121749.1-202ENST00000609313 2153 ntBASIC29.8■■■□□ 2.36
CHGBP05060 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC29.8■■■□□ 2.36
CHGBP05060 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC29.8■■■□□ 2.36
CHGBP05060 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC29.8■■■□□ 2.36
CHGBP05060 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC29.8■■■□□ 2.36
CHGBP05060 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC29.8■■■□□ 2.36
CHGBP05060 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC29.79■■■□□ 2.36
CHGBP05060 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
CHGBP05060 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
CHGBP05060 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC29.77■■■□□ 2.36
CHGBP05060 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
CHGBP05060 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC29.76■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms