Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SIX6O95475 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SIX6O95475 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SIX6O95475 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SIX6O95475 AC018358.1-201ENST00000631079 1402 ntBASIC20.62■□□□□ 0.89
SIX6O95475 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SIX6O95475 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.62■□□□□ 0.89
SIX6O95475 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SIX6O95475 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SIX6O95475 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SIX6O95475 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIX6O95475 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SIX6O95475 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SIX6O95475 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SIX6O95475 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SIX6O95475 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SIX6O95475 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SIX6O95475 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SIX6O95475 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SIX6O95475 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SIX6O95475 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.59■□□□□ 0.89
SIX6O95475 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
SIX6O95475 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.59■□□□□ 0.89
SIX6O95475 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.59■□□□□ 0.89
SIX6O95475 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.59■□□□□ 0.89
SIX6O95475 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SIX6O95475 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SIX6O95475 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SIX6O95475 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
SIX6O95475 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SIX6O95475 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SIX6O95475 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
SIX6O95475 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
SIX6O95475 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIX6O95475 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SIX6O95475 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIX6O95475 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIX6O95475 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIX6O95475 AP004609.3-201ENST00000610705 1884 ntBASIC20.57■□□□□ 0.88
SIX6O95475 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.57■□□□□ 0.88
SIX6O95475 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIX6O95475 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SIX6O95475 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.57■□□□□ 0.88
SIX6O95475 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SIX6O95475 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SIX6O95475 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SIX6O95475 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SIX6O95475 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SIX6O95475 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SIX6O95475 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SIX6O95475 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SIX6O95475 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SIX6O95475 ZNRF2P1-201ENST00000441407 443 ntBASIC20.55■□□□□ 0.88
SIX6O95475 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIX6O95475 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SIX6O95475 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIX6O95475 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIX6O95475 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIX6O95475 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SIX6O95475 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.54■□□□□ 0.88
SIX6O95475 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.54■□□□□ 0.88
SIX6O95475 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SIX6O95475 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SIX6O95475 AL133380.1-201ENST00000506013 324 ntBASIC20.53■□□□□ 0.88
SIX6O95475 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SIX6O95475 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC20.53■□□□□ 0.88
SIX6O95475 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SIX6O95475 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.52■□□□□ 0.88
SIX6O95475 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SIX6O95475 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SIX6O95475 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SIX6O95475 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SIX6O95475 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SIX6O95475 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SIX6O95475 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SIX6O95475 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SIX6O95475 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.52■□□□□ 0.87
SIX6O95475 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SIX6O95475 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIX6O95475 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SIX6O95475 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SIX6O95475 AC142381.3-201ENST00000568208 1670 ntBASIC20.51■□□□□ 0.87
SIX6O95475 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SIX6O95475 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.5■□□□□ 0.87
SIX6O95475 AL139125.2-201ENST00000623134 1869 ntBASIC20.5■□□□□ 0.87
SIX6O95475 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIX6O95475 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SIX6O95475 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SIX6O95475 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIX6O95475 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.49■□□□□ 0.87
SIX6O95475 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIX6O95475 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
SIX6O95475 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SIX6O95475 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIX6O95475 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SIX6O95475 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SIX6O95475 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SIX6O95475 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SIX6O95475 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SIX6O95475 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms