Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.86■■□□□ 1.41
PEX1O43933 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.86■■□□□ 1.41
PEX1O43933 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.85■■□□□ 1.41
PEX1O43933 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.85■■□□□ 1.41
PEX1O43933 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.85■■□□□ 1.41
PEX1O43933 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.85■■□□□ 1.41
PEX1O43933 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
PEX1O43933 AC016575.1-201ENST00000607026 382 ntBASIC23.84■■□□□ 1.41
PEX1O43933 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PEX1O43933 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PEX1O43933 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PEX1O43933 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.83■■□□□ 1.41
PEX1O43933 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
PEX1O43933 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PEX1O43933 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
PEX1O43933 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.83■■□□□ 1.4
PEX1O43933 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
PEX1O43933 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PEX1O43933 MIR639-201ENST00000384974 98 ntBASIC23.82■■□□□ 1.4
PEX1O43933 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.82■■□□□ 1.4
PEX1O43933 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.82■■□□□ 1.4
PEX1O43933 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PEX1O43933 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
PEX1O43933 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PEX1O43933 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
PEX1O43933 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
PEX1O43933 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
PEX1O43933 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
PEX1O43933 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PEX1O43933 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.8■■□□□ 1.4
PEX1O43933 CR559946.2-201ENST00000623684 991 ntBASIC23.8■■□□□ 1.4
PEX1O43933 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
PEX1O43933 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.8■■□□□ 1.4
PEX1O43933 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PEX1O43933 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PEX1O43933 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.79■■□□□ 1.4
PEX1O43933 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.79■■□□□ 1.4
PEX1O43933 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PEX1O43933 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.4
PEX1O43933 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PEX1O43933 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PEX1O43933 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PEX1O43933 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.4
PEX1O43933 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PEX1O43933 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PEX1O43933 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
PEX1O43933 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.77■■□□□ 1.4
PEX1O43933 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PEX1O43933 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PEX1O43933 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PEX1O43933 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PEX1O43933 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PEX1O43933 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PEX1O43933 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PEX1O43933 DUX4L13-201ENST00000554103 1267 ntBASIC23.76■■□□□ 1.39
PEX1O43933 DUX4L15-201ENST00000611059 1267 ntBASIC23.76■■□□□ 1.39
PEX1O43933 DUX4L23-201ENST00000615195 1269 ntBASIC23.76■■□□□ 1.39
PEX1O43933 DUX4L24-201ENST00000617576 1269 ntBASIC23.76■■□□□ 1.39
PEX1O43933 DUX4L22-201ENST00000618238 1269 ntBASIC23.76■■□□□ 1.39
PEX1O43933 DUX4L20-201ENST00000619712 1269 ntBASIC23.76■■□□□ 1.39
PEX1O43933 DUX4L21-201ENST00000622058 1269 ntBASIC23.76■■□□□ 1.39
PEX1O43933 DUX4L10-201ENST00000622460 1267 ntBASIC23.76■■□□□ 1.39
PEX1O43933 DUX4L25-201ENST00000624915 1269 ntBASIC23.76■■□□□ 1.39
PEX1O43933 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PEX1O43933 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.75■■□□□ 1.39
PEX1O43933 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PEX1O43933 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.75■■□□□ 1.39
PEX1O43933 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PEX1O43933 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.75■■□□□ 1.39
PEX1O43933 MIR4449-201ENST00000578365 66 ntBASIC23.75■■□□□ 1.39
PEX1O43933 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PEX1O43933 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PEX1O43933 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PEX1O43933 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
PEX1O43933 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
PEX1O43933 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PEX1O43933 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PEX1O43933 DUSP8P4-201ENST00000399538 1761 ntBASIC23.74■■□□□ 1.39
PEX1O43933 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PEX1O43933 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PEX1O43933 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PEX1O43933 LINC00273-201ENST00000539813 1452 ntBASIC23.74■■□□□ 1.39
PEX1O43933 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PEX1O43933 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.73■■□□□ 1.39
PEX1O43933 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC23.73■■□□□ 1.39
PEX1O43933 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PEX1O43933 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.73■■□□□ 1.39
PEX1O43933 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PEX1O43933 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.73■■□□□ 1.39
PEX1O43933 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.73■■□□□ 1.39
PEX1O43933 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PEX1O43933 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PEX1O43933 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PEX1O43933 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PEX1O43933 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.72■■□□□ 1.39
PEX1O43933 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.72■■□□□ 1.39
PEX1O43933 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
PEX1O43933 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.72■■□□□ 1.39
PEX1O43933 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
PEX1O43933 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms