Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 RARRES2P2-201ENST00000394842 485 ntBASIC23.58■■□□□ 1.37
PCDH17O14917 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH17O14917 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
PCDH17O14917 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.57■■□□□ 1.36
PCDH17O14917 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH17O14917 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH17O14917 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH17O14917 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
PCDH17O14917 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH17O14917 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH17O14917 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDH17O14917 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.56■■□□□ 1.36
PCDH17O14917 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH17O14917 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH17O14917 AP002414.2-202ENST00000590929 1450 ntBASIC23.55■■□□□ 1.36
PCDH17O14917 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.54■■□□□ 1.36
PCDH17O14917 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDH17O14917 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDH17O14917 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
PCDH17O14917 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.54■■□□□ 1.36
PCDH17O14917 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH17O14917 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
PCDH17O14917 LINC01003-201ENST00000564834 1764 ntBASIC23.52■■□□□ 1.36
PCDH17O14917 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
PCDH17O14917 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH17O14917 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC23.52■■□□□ 1.36
PCDH17O14917 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC23.52■■□□□ 1.36
PCDH17O14917 AC060814.1-201ENST00000554326 538 ntBASIC23.52■■□□□ 1.36
PCDH17O14917 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDH17O14917 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDH17O14917 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDH17O14917 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDH17O14917 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
PCDH17O14917 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC23.5■■□□□ 1.35
PCDH17O14917 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH17O14917 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.5■■□□□ 1.35
PCDH17O14917 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH17O14917 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH17O14917 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.49■■□□□ 1.35
PCDH17O14917 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDH17O14917 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.49■■□□□ 1.35
PCDH17O14917 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDH17O14917 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
PCDH17O14917 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PCDH17O14917 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDH17O14917 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.48■■□□□ 1.35
PCDH17O14917 ABHD17AP5-201ENST00000580133 923 ntBASIC23.48■■□□□ 1.35
PCDH17O14917 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.48■■□□□ 1.35
PCDH17O14917 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDH17O14917 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.47■■□□□ 1.35
PCDH17O14917 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH17O14917 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PCDH17O14917 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.47■■□□□ 1.35
PCDH17O14917 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.47■■□□□ 1.35
PCDH17O14917 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDH17O14917 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDH17O14917 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
PCDH17O14917 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.46■■□□□ 1.35
PCDH17O14917 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDH17O14917 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
PCDH17O14917 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDH17O14917 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.45■■□□□ 1.34
PCDH17O14917 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
PCDH17O14917 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDH17O14917 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH17O14917 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH17O14917 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH17O14917 AC092296.2-201ENST00000589470 999 ntBASIC23.44■■□□□ 1.34
PCDH17O14917 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PCDH17O14917 ECEL1P2-201ENST00000461596 1295 ntBASIC23.43■■□□□ 1.34
PCDH17O14917 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDH17O14917 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
PCDH17O14917 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
PCDH17O14917 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.42■■□□□ 1.34
PCDH17O14917 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.42■■□□□ 1.34
PCDH17O14917 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.42■■□□□ 1.34
PCDH17O14917 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.42■■□□□ 1.34
PCDH17O14917 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
PCDH17O14917 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDH17O14917 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDH17O14917 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
PCDH17O14917 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
PCDH17O14917 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.4■■□□□ 1.34
PCDH17O14917 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
PCDH17O14917 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDH17O14917 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDH17O14917 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
PCDH17O14917 AC018358.1-201ENST00000631079 1402 ntBASIC23.4■■□□□ 1.34
PCDH17O14917 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
PCDH17O14917 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH17O14917 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH17O14917 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.38■■□□□ 1.33
PCDH17O14917 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH17O14917 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.38■■□□□ 1.33
PCDH17O14917 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH17O14917 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH17O14917 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
PCDH17O14917 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH17O14917 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
PCDH17O14917 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms