Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
SPDYE3A6NKU9 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.33■■■□□ 2.13
SPDYE3A6NKU9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.33■■■□□ 2.13
SPDYE3A6NKU9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC28.33■■■□□ 2.12
SPDYE3A6NKU9 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.12
SPDYE3A6NKU9 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SPDYE3A6NKU9 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.32■■■□□ 2.12
SPDYE3A6NKU9 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC28.32■■■□□ 2.12
SPDYE3A6NKU9 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SPDYE3A6NKU9 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
SPDYE3A6NKU9 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC28.31■■■□□ 2.12
SPDYE3A6NKU9 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SPDYE3A6NKU9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SPDYE3A6NKU9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.3■■■□□ 2.12
SPDYE3A6NKU9 ABHD17AP5-201ENST00000580133 923 ntBASIC28.3■■■□□ 2.12
SPDYE3A6NKU9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
SPDYE3A6NKU9 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SPDYE3A6NKU9 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC28.29■■■□□ 2.12
SPDYE3A6NKU9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
SPDYE3A6NKU9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.28■■■□□ 2.12
SPDYE3A6NKU9 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SPDYE3A6NKU9 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
SPDYE3A6NKU9 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SPDYE3A6NKU9 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
SPDYE3A6NKU9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
SPDYE3A6NKU9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
SPDYE3A6NKU9 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SPDYE3A6NKU9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
SPDYE3A6NKU9 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
SPDYE3A6NKU9 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
SPDYE3A6NKU9 REST-210ENST00000638187 1334 ntTSL 5 BASIC28.26■■■□□ 2.11
SPDYE3A6NKU9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SPDYE3A6NKU9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.11
SPDYE3A6NKU9 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SPDYE3A6NKU9 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.24■■■□□ 2.11
SPDYE3A6NKU9 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.24■■■□□ 2.11
SPDYE3A6NKU9 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC28.24■■■□□ 2.11
SPDYE3A6NKU9 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SPDYE3A6NKU9 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC28.23■■■□□ 2.11
SPDYE3A6NKU9 SMPD5-203ENST00000639008 1464 ntBASIC28.23■■■□□ 2.11
SPDYE3A6NKU9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC28.22■■■□□ 2.11
SPDYE3A6NKU9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
SPDYE3A6NKU9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC28.22■■■□□ 2.11
SPDYE3A6NKU9 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
SPDYE3A6NKU9 AL449106.1-201ENST00000608517 1980 ntBASIC28.21■■■□□ 2.11
SPDYE3A6NKU9 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SPDYE3A6NKU9 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SPDYE3A6NKU9 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.2■■■□□ 2.1
SPDYE3A6NKU9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SPDYE3A6NKU9 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.19■■■□□ 2.1
SPDYE3A6NKU9 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28.19■■■□□ 2.1
SPDYE3A6NKU9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.19■■■□□ 2.1
SPDYE3A6NKU9 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
SPDYE3A6NKU9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
SPDYE3A6NKU9 AC025884.2-201ENST00000553429 711 ntBASIC28.18■■■□□ 2.1
SPDYE3A6NKU9 AC007029.1-201ENST00000604183 313 ntBASIC28.18■■■□□ 2.1
SPDYE3A6NKU9 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SPDYE3A6NKU9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
SPDYE3A6NKU9 AL359504.2-201ENST00000605506 1601 ntBASIC28.18■■■□□ 2.1
SPDYE3A6NKU9 HYI-213ENST00000583037 1322 ntTSL 5 BASIC28.18■■■□□ 2.1
SPDYE3A6NKU9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SPDYE3A6NKU9 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC28.17■■■□□ 2.1
SPDYE3A6NKU9 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.17■■■□□ 2.1
SPDYE3A6NKU9 SHF-208ENST00000560734 1731 ntTSL 3 BASIC28.16■■■□□ 2.1
SPDYE3A6NKU9 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SPDYE3A6NKU9 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.16■■■□□ 2.1
SPDYE3A6NKU9 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.15■■■□□ 2.1
SPDYE3A6NKU9 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
SPDYE3A6NKU9 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC28.14■■■□□ 2.1
SPDYE3A6NKU9 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
SPDYE3A6NKU9 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC28.14■■■□□ 2.1
SPDYE3A6NKU9 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC28.13■■■□□ 2.09
SPDYE3A6NKU9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
SPDYE3A6NKU9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC28.12■■■□□ 2.09
SPDYE3A6NKU9 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
SPDYE3A6NKU9 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
SPDYE3A6NKU9 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SPDYE3A6NKU9 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SPDYE3A6NKU9 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SPDYE3A6NKU9 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.11■■■□□ 2.09
SPDYE3A6NKU9 NTF6A-201ENST00000591175 560 ntBASIC28.11■■■□□ 2.09
SPDYE3A6NKU9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
SPDYE3A6NKU9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
SPDYE3A6NKU9 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
SPDYE3A6NKU9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28.1■■■□□ 2.09
SPDYE3A6NKU9 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
SPDYE3A6NKU9 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
SPDYE3A6NKU9 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SPDYE3A6NKU9 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SPDYE3A6NKU9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
SPDYE3A6NKU9 MIR3960-201ENST00000583311 91 ntBASIC28.09■■■□□ 2.09
SPDYE3A6NKU9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
SPDYE3A6NKU9 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC28.09■■■□□ 2.09
SPDYE3A6NKU9 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SPDYE3A6NKU9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.08■■■□□ 2.09
SPDYE3A6NKU9 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
SPDYE3A6NKU9 RP9P-202ENST00000450133 1212 ntBASIC28.08■■■□□ 2.09
SPDYE3A6NKU9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
SPDYE3A6NKU9 U85056.1-201ENST00000616429 682 ntBASIC28.08■■■□□ 2.09
SPDYE3A6NKU9 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC28.08■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms