Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMIM9A6NGZ8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC17.91■□□□□ 0.46
SMIM9A6NGZ8 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC17.91■□□□□ 0.46
SMIM9A6NGZ8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMIM9A6NGZ8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMIM9A6NGZ8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SMIM9A6NGZ8 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.9■□□□□ 0.46
SMIM9A6NGZ8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMIM9A6NGZ8 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.9■□□□□ 0.46
SMIM9A6NGZ8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SMIM9A6NGZ8 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMIM9A6NGZ8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SMIM9A6NGZ8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SMIM9A6NGZ8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMIM9A6NGZ8 ECEL1P2-201ENST00000461596 1295 ntBASIC17.87■□□□□ 0.45
SMIM9A6NGZ8 HSD17B1P1-201ENST00000590052 955 ntBASIC17.87■□□□□ 0.45
SMIM9A6NGZ8 RNF126P1-201ENST00000567452 1320 ntBASIC17.87■□□□□ 0.45
SMIM9A6NGZ8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMIM9A6NGZ8 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SMIM9A6NGZ8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.86■□□□□ 0.45
SMIM9A6NGZ8 AC092296.2-201ENST00000589470 999 ntBASIC17.86■□□□□ 0.45
SMIM9A6NGZ8 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC17.86■□□□□ 0.45
SMIM9A6NGZ8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM9A6NGZ8 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM9A6NGZ8 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM9A6NGZ8 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
SMIM9A6NGZ8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM9A6NGZ8 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM9A6NGZ8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SMIM9A6NGZ8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.85■□□□□ 0.45
SMIM9A6NGZ8 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.85■□□□□ 0.45
SMIM9A6NGZ8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SMIM9A6NGZ8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC17.84■□□□□ 0.45
SMIM9A6NGZ8 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SMIM9A6NGZ8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SMIM9A6NGZ8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SMIM9A6NGZ8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SMIM9A6NGZ8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SMIM9A6NGZ8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMIM9A6NGZ8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.83■□□□□ 0.44
SMIM9A6NGZ8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMIM9A6NGZ8 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
SMIM9A6NGZ8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.82■□□□□ 0.44
SMIM9A6NGZ8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMIM9A6NGZ8 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.82■□□□□ 0.44
SMIM9A6NGZ8 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
SMIM9A6NGZ8 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM9A6NGZ8 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM9A6NGZ8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC17.81■□□□□ 0.44
SMIM9A6NGZ8 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SMIM9A6NGZ8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC17.81■□□□□ 0.44
SMIM9A6NGZ8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM9A6NGZ8 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SMIM9A6NGZ8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SMIM9A6NGZ8 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM9A6NGZ8 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC17.8■□□□□ 0.44
SMIM9A6NGZ8 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM9A6NGZ8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM9A6NGZ8 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM9A6NGZ8 AL449106.1-201ENST00000608517 1980 ntBASIC17.79■□□□□ 0.44
SMIM9A6NGZ8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM9A6NGZ8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM9A6NGZ8 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM9A6NGZ8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.78■□□□□ 0.44
SMIM9A6NGZ8 SMPD5-203ENST00000639008 1464 ntBASIC17.78■□□□□ 0.44
SMIM9A6NGZ8 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM9A6NGZ8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.78■□□□□ 0.44
SMIM9A6NGZ8 AL157400.5-201ENST00000507624 621 ntBASIC17.78■□□□□ 0.44
SMIM9A6NGZ8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM9A6NGZ8 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.78■□□□□ 0.44
SMIM9A6NGZ8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM9A6NGZ8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM9A6NGZ8 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM9A6NGZ8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.77■□□□□ 0.44
SMIM9A6NGZ8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.77■□□□□ 0.44
SMIM9A6NGZ8 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMIM9A6NGZ8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SMIM9A6NGZ8 RARRES2P2-201ENST00000394842 485 ntBASIC17.77■□□□□ 0.44
SMIM9A6NGZ8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.77■□□□□ 0.44
SMIM9A6NGZ8 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.77■□□□□ 0.44
SMIM9A6NGZ8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
SMIM9A6NGZ8 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
SMIM9A6NGZ8 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SMIM9A6NGZ8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMIM9A6NGZ8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.76■□□□□ 0.43
SMIM9A6NGZ8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.76■□□□□ 0.43
SMIM9A6NGZ8 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SMIM9A6NGZ8 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SMIM9A6NGZ8 AC025884.2-201ENST00000553429 711 ntBASIC17.75■□□□□ 0.43
SMIM9A6NGZ8 MIR3960-201ENST00000583311 91 ntBASIC17.75■□□□□ 0.43
SMIM9A6NGZ8 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SMIM9A6NGZ8 AL359504.2-201ENST00000605506 1601 ntBASIC17.75■□□□□ 0.43
SMIM9A6NGZ8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMIM9A6NGZ8 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SMIM9A6NGZ8 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMIM9A6NGZ8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SMIM9A6NGZ8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.74■□□□□ 0.43
SMIM9A6NGZ8 AC142472.1-201ENST00000612013 1741 ntBASIC17.74■□□□□ 0.43
SMIM9A6NGZ8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC17.74■□□□□ 0.43
SMIM9A6NGZ8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms