Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
TBC1D3FA6NER0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
TBC1D3FA6NER0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TBC1D3FA6NER0 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.8■■□□□ 1.56
TBC1D3FA6NER0 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
TBC1D3FA6NER0 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
TBC1D3FA6NER0 RP9P-202ENST00000450133 1212 ntBASIC24.79■■□□□ 1.56
TBC1D3FA6NER0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
TBC1D3FA6NER0 AC026202.3-201ENST00000600805 1127 ntBASIC24.79■■□□□ 1.56
TBC1D3FA6NER0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TBC1D3FA6NER0 AC139426.1-201ENST00000568218 2529 ntBASIC24.78■■□□□ 1.56
TBC1D3FA6NER0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TBC1D3FA6NER0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.78■■□□□ 1.56
TBC1D3FA6NER0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.78■■□□□ 1.56
TBC1D3FA6NER0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TBC1D3FA6NER0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
TBC1D3FA6NER0 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TBC1D3FA6NER0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.78■■□□□ 1.56
TBC1D3FA6NER0 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
TBC1D3FA6NER0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.77■■□□□ 1.56
TBC1D3FA6NER0 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TBC1D3FA6NER0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TBC1D3FA6NER0 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.77■■□□□ 1.56
TBC1D3FA6NER0 AC129492.7-201ENST00000622992 756 ntBASIC24.77■■□□□ 1.56
TBC1D3FA6NER0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.77■■□□□ 1.56
TBC1D3FA6NER0 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TBC1D3FA6NER0 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
TBC1D3FA6NER0 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
TBC1D3FA6NER0 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.76■■□□□ 1.55
TBC1D3FA6NER0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
TBC1D3FA6NER0 AC093536.1-201ENST00000569153 554 ntBASIC24.76■■□□□ 1.55
TBC1D3FA6NER0 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.75■■□□□ 1.55
TBC1D3FA6NER0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TBC1D3FA6NER0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.75■■□□□ 1.55
TBC1D3FA6NER0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.75■■□□□ 1.55
TBC1D3FA6NER0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TBC1D3FA6NER0 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TBC1D3FA6NER0 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.74■■□□□ 1.55
TBC1D3FA6NER0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TBC1D3FA6NER0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TBC1D3FA6NER0 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.74■■□□□ 1.55
TBC1D3FA6NER0 DUX4L18-201ENST00000553347 1267 ntBASIC24.74■■□□□ 1.55
TBC1D3FA6NER0 MIR3960-201ENST00000583311 91 ntBASIC24.74■■□□□ 1.55
TBC1D3FA6NER0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.74■■□□□ 1.55
TBC1D3FA6NER0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
TBC1D3FA6NER0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.74■■□□□ 1.55
TBC1D3FA6NER0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
TBC1D3FA6NER0 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TBC1D3FA6NER0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
TBC1D3FA6NER0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TBC1D3FA6NER0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC24.73■■□□□ 1.55
TBC1D3FA6NER0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
TBC1D3FA6NER0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TBC1D3FA6NER0 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
TBC1D3FA6NER0 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.71■■□□□ 1.55
TBC1D3FA6NER0 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TBC1D3FA6NER0 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
TBC1D3FA6NER0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TBC1D3FA6NER0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.71■■□□□ 1.55
TBC1D3FA6NER0 WHAMMP3-201ENST00000611636 1609 ntBASIC24.71■■□□□ 1.55
TBC1D3FA6NER0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.7■■□□□ 1.55
TBC1D3FA6NER0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC24.7■■□□□ 1.54
TBC1D3FA6NER0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TBC1D3FA6NER0 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
TBC1D3FA6NER0 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TBC1D3FA6NER0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
TBC1D3FA6NER0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
TBC1D3FA6NER0 AL359504.2-201ENST00000605506 1601 ntBASIC24.69■■□□□ 1.54
TBC1D3FA6NER0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.69■■□□□ 1.54
TBC1D3FA6NER0 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
TBC1D3FA6NER0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
TBC1D3FA6NER0 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
TBC1D3FA6NER0 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
TBC1D3FA6NER0 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC24.68■■□□□ 1.54
TBC1D3FA6NER0 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC24.68■■□□□ 1.54
TBC1D3FA6NER0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
TBC1D3FA6NER0 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
TBC1D3FA6NER0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.67■■□□□ 1.54
TBC1D3FA6NER0 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
TBC1D3FA6NER0 RAP2CP1-202ENST00000605179 643 ntBASIC24.67■■□□□ 1.54
TBC1D3FA6NER0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
TBC1D3FA6NER0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.67■■□□□ 1.54
TBC1D3FA6NER0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.66■■□□□ 1.54
TBC1D3FA6NER0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.66■■□□□ 1.54
TBC1D3FA6NER0 DRD5P2-201ENST00000421395 2012 ntBASIC24.66■■□□□ 1.54
TBC1D3FA6NER0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
TBC1D3FA6NER0 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
TBC1D3FA6NER0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TBC1D3FA6NER0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.65■■□□□ 1.54
TBC1D3FA6NER0 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
TBC1D3FA6NER0 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
TBC1D3FA6NER0 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
TBC1D3FA6NER0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
TBC1D3FA6NER0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.63■■□□□ 1.53
TBC1D3FA6NER0 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
TBC1D3FA6NER0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
TBC1D3FA6NER0 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
TBC1D3FA6NER0 DUX4L9-201ENST00000449051 1259 ntBASIC24.63■■□□□ 1.53
TBC1D3FA6NER0 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC24.63■■□□□ 1.53
TBC1D3FA6NER0 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms