Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.64■□□□□ 0.57
TRAV25A0A0B4J276 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV25A0A0B4J276 ECEL1P2-201ENST00000461596 1295 ntBASIC18.63■□□□□ 0.57
TRAV25A0A0B4J276 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV25A0A0B4J276 AC092296.2-201ENST00000589470 999 ntBASIC18.63■□□□□ 0.57
TRAV25A0A0B4J276 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV25A0A0B4J276 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV25A0A0B4J276 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TRAV25A0A0B4J276 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV25A0A0B4J276 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TRAV25A0A0B4J276 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TRAV25A0A0B4J276 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV25A0A0B4J276 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV25A0A0B4J276 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV25A0A0B4J276 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.61■□□□□ 0.57
TRAV25A0A0B4J276 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAV25A0A0B4J276 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAV25A0A0B4J276 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
TRAV25A0A0B4J276 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.6■□□□□ 0.57
TRAV25A0A0B4J276 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV25A0A0B4J276 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.59■□□□□ 0.57
TRAV25A0A0B4J276 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV25A0A0B4J276 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRAV25A0A0B4J276 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TRAV25A0A0B4J276 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV25A0A0B4J276 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
TRAV25A0A0B4J276 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV25A0A0B4J276 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRAV25A0A0B4J276 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC18.57■□□□□ 0.56
TRAV25A0A0B4J276 AL157400.5-201ENST00000507624 621 ntBASIC18.57■□□□□ 0.56
TRAV25A0A0B4J276 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRAV25A0A0B4J276 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV25A0A0B4J276 MOB2-207ENST00000614710 705 ntTSL 5 BASIC18.56■□□□□ 0.56
TRAV25A0A0B4J276 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV25A0A0B4J276 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
TRAV25A0A0B4J276 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRAV25A0A0B4J276 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV25A0A0B4J276 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV25A0A0B4J276 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV25A0A0B4J276 RARRES2P2-201ENST00000394842 485 ntBASIC18.55■□□□□ 0.56
TRAV25A0A0B4J276 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV25A0A0B4J276 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TRAV25A0A0B4J276 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TRAV25A0A0B4J276 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TRAV25A0A0B4J276 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV25A0A0B4J276 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV25A0A0B4J276 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV25A0A0B4J276 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV25A0A0B4J276 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.54■□□□□ 0.56
TRAV25A0A0B4J276 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TRAV25A0A0B4J276 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.53■□□□□ 0.56
TRAV25A0A0B4J276 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV25A0A0B4J276 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV25A0A0B4J276 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.53■□□□□ 0.56
TRAV25A0A0B4J276 AL449106.1-201ENST00000608517 1980 ntBASIC18.53■□□□□ 0.56
TRAV25A0A0B4J276 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRAV25A0A0B4J276 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC18.53■□□□□ 0.56
TRAV25A0A0B4J276 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV25A0A0B4J276 SMPD5-203ENST00000639008 1464 ntBASIC18.52■□□□□ 0.56
TRAV25A0A0B4J276 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAV25A0A0B4J276 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TRAV25A0A0B4J276 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC18.52■□□□□ 0.56
TRAV25A0A0B4J276 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC18.52■□□□□ 0.56
TRAV25A0A0B4J276 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRAV25A0A0B4J276 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TRAV25A0A0B4J276 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRAV25A0A0B4J276 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV25A0A0B4J276 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC18.51■□□□□ 0.55
TRAV25A0A0B4J276 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC18.51■□□□□ 0.55
TRAV25A0A0B4J276 PFN2-211ENST00000489155 636 ntTSL 4 BASIC18.51■□□□□ 0.55
TRAV25A0A0B4J276 AC025884.2-201ENST00000553429 711 ntBASIC18.51■□□□□ 0.55
TRAV25A0A0B4J276 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRAV25A0A0B4J276 MIR3960-201ENST00000583311 91 ntBASIC18.5■□□□□ 0.55
TRAV25A0A0B4J276 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV25A0A0B4J276 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV25A0A0B4J276 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV25A0A0B4J276 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRAV25A0A0B4J276 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV25A0A0B4J276 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV25A0A0B4J276 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV25A0A0B4J276 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV25A0A0B4J276 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV25A0A0B4J276 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV25A0A0B4J276 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRAV25A0A0B4J276 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV25A0A0B4J276 AL359504.2-201ENST00000605506 1601 ntBASIC18.49■□□□□ 0.55
TRAV25A0A0B4J276 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV25A0A0B4J276 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV25A0A0B4J276 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAV25A0A0B4J276 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV25A0A0B4J276 AC142472.1-201ENST00000612013 1741 ntBASIC18.47■□□□□ 0.55
TRAV25A0A0B4J276 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV25A0A0B4J276 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.47■□□□□ 0.55
TRAV25A0A0B4J276 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TRAV25A0A0B4J276 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV25A0A0B4J276 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV25A0A0B4J276 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV25A0A0B4J276 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV25A0A0B4J276 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV25A0A0B4J276 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms