Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.7■□□□□ 0.9
TRBV6-7A0A0A0MS04 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TRBV6-7A0A0A0MS04 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV6-7A0A0A0MS04 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV6-7A0A0A0MS04 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV6-7A0A0A0MS04 AC087741.3-201ENST00000624270 1347 ntBASIC20.68■□□□□ 0.9
TRBV6-7A0A0A0MS04 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV6-7A0A0A0MS04 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRBV6-7A0A0A0MS04 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV6-7A0A0A0MS04 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.67■□□□□ 0.9
TRBV6-7A0A0A0MS04 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRBV6-7A0A0A0MS04 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.67■□□□□ 0.9
TRBV6-7A0A0A0MS04 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.67■□□□□ 0.9
TRBV6-7A0A0A0MS04 DUSP8P4-201ENST00000399538 1761 ntBASIC20.67■□□□□ 0.9
TRBV6-7A0A0A0MS04 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV6-7A0A0A0MS04 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.66■□□□□ 0.9
TRBV6-7A0A0A0MS04 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRBV6-7A0A0A0MS04 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV6-7A0A0A0MS04 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV6-7A0A0A0MS04 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV6-7A0A0A0MS04 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRBV6-7A0A0A0MS04 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
TRBV6-7A0A0A0MS04 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRBV6-7A0A0A0MS04 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRBV6-7A0A0A0MS04 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.9
TRBV6-7A0A0A0MS04 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.64■□□□□ 0.89
TRBV6-7A0A0A0MS04 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.64■□□□□ 0.89
TRBV6-7A0A0A0MS04 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.64■□□□□ 0.89
TRBV6-7A0A0A0MS04 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.64■□□□□ 0.89
TRBV6-7A0A0A0MS04 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV6-7A0A0A0MS04 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV6-7A0A0A0MS04 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV6-7A0A0A0MS04 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV6-7A0A0A0MS04 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV6-7A0A0A0MS04 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRBV6-7A0A0A0MS04 AC110285.7-201ENST00000624417 1536 ntBASIC20.63■□□□□ 0.89
TRBV6-7A0A0A0MS04 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV6-7A0A0A0MS04 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV6-7A0A0A0MS04 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TRBV6-7A0A0A0MS04 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC20.62■□□□□ 0.89
TRBV6-7A0A0A0MS04 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.62■□□□□ 0.89
TRBV6-7A0A0A0MS04 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRBV6-7A0A0A0MS04 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.61■□□□□ 0.89
TRBV6-7A0A0A0MS04 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV6-7A0A0A0MS04 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV6-7A0A0A0MS04 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV6-7A0A0A0MS04 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRBV6-7A0A0A0MS04 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.61■□□□□ 0.89
TRBV6-7A0A0A0MS04 AC044849.2-201ENST00000606596 710 ntBASIC20.61■□□□□ 0.89
TRBV6-7A0A0A0MS04 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.61■□□□□ 0.89
TRBV6-7A0A0A0MS04 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TRBV6-7A0A0A0MS04 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TRBV6-7A0A0A0MS04 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV6-7A0A0A0MS04 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRBV6-7A0A0A0MS04 AP004609.3-201ENST00000610705 1884 ntBASIC20.6■□□□□ 0.89
TRBV6-7A0A0A0MS04 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
TRBV6-7A0A0A0MS04 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
TRBV6-7A0A0A0MS04 AL162393.1-201ENST00000437852 946 ntBASIC20.59■□□□□ 0.89
TRBV6-7A0A0A0MS04 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.58■□□□□ 0.89
TRBV6-7A0A0A0MS04 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRBV6-7A0A0A0MS04 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TRBV6-7A0A0A0MS04 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRBV6-7A0A0A0MS04 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV6-7A0A0A0MS04 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV6-7A0A0A0MS04 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV6-7A0A0A0MS04 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV6-7A0A0A0MS04 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.57■□□□□ 0.88
TRBV6-7A0A0A0MS04 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV6-7A0A0A0MS04 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRBV6-7A0A0A0MS04 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.57■□□□□ 0.88
TRBV6-7A0A0A0MS04 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.56■□□□□ 0.88
TRBV6-7A0A0A0MS04 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV6-7A0A0A0MS04 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TRBV6-7A0A0A0MS04 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.56■□□□□ 0.88
TRBV6-7A0A0A0MS04 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV6-7A0A0A0MS04 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRBV6-7A0A0A0MS04 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV6-7A0A0A0MS04 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.55■□□□□ 0.88
TRBV6-7A0A0A0MS04 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRBV6-7A0A0A0MS04 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV6-7A0A0A0MS04 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV6-7A0A0A0MS04 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV6-7A0A0A0MS04 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.54■□□□□ 0.88
TRBV6-7A0A0A0MS04 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TRBV6-7A0A0A0MS04 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRBV6-7A0A0A0MS04 AC092803.2-201ENST00000564287 1899 ntBASIC20.54■□□□□ 0.88
TRBV6-7A0A0A0MS04 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRBV6-7A0A0A0MS04 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRBV6-7A0A0A0MS04 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRBV6-7A0A0A0MS04 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRBV6-7A0A0A0MS04 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
TRBV6-7A0A0A0MS04 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRBV6-7A0A0A0MS04 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV6-7A0A0A0MS04 AC142472.1-201ENST00000612013 1741 ntBASIC20.51■□□□□ 0.87
TRBV6-7A0A0A0MS04 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV6-7A0A0A0MS04 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV6-7A0A0A0MS04 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV6-7A0A0A0MS04 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRBV6-7A0A0A0MS04 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRBV6-7A0A0A0MS04 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms