Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV2-28A0A075B6P5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC16.23■□□□□ 0.19
IGKV2-28A0A075B6P5 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC16.23■□□□□ 0.19
IGKV2-28A0A075B6P5 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV2-28A0A075B6P5 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV2-28A0A075B6P5 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
IGKV2-28A0A075B6P5 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV2-28A0A075B6P5 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV2-28A0A075B6P5 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC16.23■□□□□ 0.19
IGKV2-28A0A075B6P5 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV2-28A0A075B6P5 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV2-28A0A075B6P5 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IGKV2-28A0A075B6P5 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IGKV2-28A0A075B6P5 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IGKV2-28A0A075B6P5 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IGKV2-28A0A075B6P5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC16.21■□□□□ 0.19
IGKV2-28A0A075B6P5 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
IGKV2-28A0A075B6P5 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IGKV2-28A0A075B6P5 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IGKV2-28A0A075B6P5 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IGKV2-28A0A075B6P5 ERN1-208ENST00000606895 2068 ntBASIC16.21■□□□□ 0.19
IGKV2-28A0A075B6P5 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
IGKV2-28A0A075B6P5 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
IGKV2-28A0A075B6P5 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.2■□□□□ 0.18
IGKV2-28A0A075B6P5 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC16.2■□□□□ 0.18
IGKV2-28A0A075B6P5 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC16.2■□□□□ 0.18
IGKV2-28A0A075B6P5 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
IGKV2-28A0A075B6P5 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
IGKV2-28A0A075B6P5 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IGKV2-28A0A075B6P5 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
IGKV2-28A0A075B6P5 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
IGKV2-28A0A075B6P5 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
IGKV2-28A0A075B6P5 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
IGKV2-28A0A075B6P5 RPS2-209ENST00000529806 993 ntTSL 3 BASIC16.19■□□□□ 0.18
IGKV2-28A0A075B6P5 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IGKV2-28A0A075B6P5 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IGKV2-28A0A075B6P5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IGKV2-28A0A075B6P5 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
IGKV2-28A0A075B6P5 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
IGKV2-28A0A075B6P5 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC16.18■□□□□ 0.18
IGKV2-28A0A075B6P5 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC16.18■□□□□ 0.18
IGKV2-28A0A075B6P5 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IGKV2-28A0A075B6P5 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
IGKV2-28A0A075B6P5 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IGKV2-28A0A075B6P5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IGKV2-28A0A075B6P5 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IGKV2-28A0A075B6P5 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IGKV2-28A0A075B6P5 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC16.17■□□□□ 0.18
IGKV2-28A0A075B6P5 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IGKV2-28A0A075B6P5 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC16.17■□□□□ 0.18
IGKV2-28A0A075B6P5 MIR762-201ENST00000390236 83 ntBASIC16.17■□□□□ 0.18
IGKV2-28A0A075B6P5 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IGKV2-28A0A075B6P5 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
IGKV2-28A0A075B6P5 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IGKV2-28A0A075B6P5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
IGKV2-28A0A075B6P5 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IGKV2-28A0A075B6P5 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IGKV2-28A0A075B6P5 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC16.16■□□□□ 0.18
IGKV2-28A0A075B6P5 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IGKV2-28A0A075B6P5 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IGKV2-28A0A075B6P5 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IGKV2-28A0A075B6P5 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IGKV2-28A0A075B6P5 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
IGKV2-28A0A075B6P5 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC16.16■□□□□ 0.18
IGKV2-28A0A075B6P5 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC16.16■□□□□ 0.18
IGKV2-28A0A075B6P5 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC16.16■□□□□ 0.18
IGKV2-28A0A075B6P5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
IGKV2-28A0A075B6P5 AP004609.3-201ENST00000610705 1884 ntBASIC16.16■□□□□ 0.18
IGKV2-28A0A075B6P5 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
IGKV2-28A0A075B6P5 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IGKV2-28A0A075B6P5 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
IGKV2-28A0A075B6P5 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
IGKV2-28A0A075B6P5 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC16.15■□□□□ 0.18
IGKV2-28A0A075B6P5 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IGKV2-28A0A075B6P5 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IGKV2-28A0A075B6P5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IGKV2-28A0A075B6P5 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
IGKV2-28A0A075B6P5 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC16.14■□□□□ 0.17
IGKV2-28A0A075B6P5 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IGKV2-28A0A075B6P5 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IGKV2-28A0A075B6P5 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC16.14■□□□□ 0.17
IGKV2-28A0A075B6P5 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
IGKV2-28A0A075B6P5 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IGKV2-28A0A075B6P5 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC16.14■□□□□ 0.17
IGKV2-28A0A075B6P5 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
IGKV2-28A0A075B6P5 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
IGKV2-28A0A075B6P5 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
IGKV2-28A0A075B6P5 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV2-28A0A075B6P5 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV2-28A0A075B6P5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC16.13■□□□□ 0.17
IGKV2-28A0A075B6P5 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
IGKV2-28A0A075B6P5 MEST-211ENST00000437945 1455 ntTSL 5 BASIC16.13■□□□□ 0.17
IGKV2-28A0A075B6P5 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV2-28A0A075B6P5 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
IGKV2-28A0A075B6P5 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
IGKV2-28A0A075B6P5 CHML-205ENST00000638160 705 ntTSL 3 BASIC16.12■□□□□ 0.17
IGKV2-28A0A075B6P5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
IGKV2-28A0A075B6P5 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
IGKV2-28A0A075B6P5 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
IGKV2-28A0A075B6P5 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms