Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC89Q8N998 AL023803.3-201ENST00000615559 522 ntBASIC18.83■□□□□ 0.6
CCDC89Q8N998 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC89Q8N998 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC89Q8N998 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CCDC89Q8N998 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC89Q8N998 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CCDC89Q8N998 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC89Q8N998 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CCDC89Q8N998 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC89Q8N998 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC89Q8N998 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC89Q8N998 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC89Q8N998 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC89Q8N998 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCDC89Q8N998 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC89Q8N998 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC89Q8N998 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC89Q8N998 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC89Q8N998 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC89Q8N998 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC89Q8N998 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC89Q8N998 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC89Q8N998 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC89Q8N998 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC89Q8N998 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC89Q8N998 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.82■□□□□ 0.6
CCDC89Q8N998 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC89Q8N998 MIR718-201ENST00000390190 70 ntBASIC18.82■□□□□ 0.6
CCDC89Q8N998 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC89Q8N998 CCR12P-201ENST00000446203 998 ntBASIC18.82■□□□□ 0.6
CCDC89Q8N998 RBM17P1-201ENST00000453646 1190 ntBASIC18.82■□□□□ 0.6
CCDC89Q8N998 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.82■□□□□ 0.6
CCDC89Q8N998 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.82■□□□□ 0.6
CCDC89Q8N998 AL353719.1-201ENST00000566847 864 ntBASIC18.82■□□□□ 0.6
CCDC89Q8N998 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC89Q8N998 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC89Q8N998 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC89Q8N998 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC89Q8N998 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCDC89Q8N998 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC89Q8N998 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC89Q8N998 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC89Q8N998 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC89Q8N998 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC89Q8N998 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC89Q8N998 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC89Q8N998 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC89Q8N998 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC89Q8N998 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC89Q8N998 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC89Q8N998 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC89Q8N998 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC89Q8N998 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC89Q8N998 AC009065.1-201ENST00000564055 1225 ntBASIC18.81■□□□□ 0.6
CCDC89Q8N998 MIR4785-201ENST00000585005 73 ntBASIC18.81■□□□□ 0.6
CCDC89Q8N998 CR769767.2-201ENST00000622735 460 ntBASIC18.81■□□□□ 0.6
CCDC89Q8N998 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC89Q8N998 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC89Q8N998 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC89Q8N998 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC89Q8N998 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC89Q8N998 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC89Q8N998 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC89Q8N998 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC89Q8N998 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC89Q8N998 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CCDC89Q8N998 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC89Q8N998 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC89Q8N998 SIRPAP1-201ENST00000448467 1770 ntBASIC18.81■□□□□ 0.6
CCDC89Q8N998 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC89Q8N998 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC89Q8N998 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC89Q8N998 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC89Q8N998 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC89Q8N998 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC89Q8N998 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC89Q8N998 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC89Q8N998 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.8■□□□□ 0.6
CCDC89Q8N998 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC89Q8N998 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC89Q8N998 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC89Q8N998 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CCDC89Q8N998 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC89Q8N998 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CCDC89Q8N998 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
CCDC89Q8N998 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC89Q8N998 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC89Q8N998 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC89Q8N998 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC89Q8N998 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC89Q8N998 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC89Q8N998 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.8■□□□□ 0.6
CCDC89Q8N998 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC89Q8N998 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC89Q8N998 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CCDC89Q8N998 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC89Q8N998 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC89Q8N998 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC89Q8N998 AC006116.8-202ENST00000587620 1550 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms