Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
SPTSSBQ8NFR3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SPTSSBQ8NFR3 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SPTSSBQ8NFR3 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
SPTSSBQ8NFR3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC9.99□□□□□ -0.81
SPTSSBQ8NFR3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
SPTSSBQ8NFR3 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SPTSSBQ8NFR3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC9.99□□□□□ -0.81
SPTSSBQ8NFR3 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC9.99□□□□□ -0.81
SPTSSBQ8NFR3 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
SPTSSBQ8NFR3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SPTSSBQ8NFR3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 CICP4-201ENST00000447359 2812 ntBASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 CROCCP3-202ENST00000420820 1947 ntBASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 RNF126P1-201ENST00000567452 1320 ntBASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC9.98□□□□□ -0.81
SPTSSBQ8NFR3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SPTSSBQ8NFR3 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
SPTSSBQ8NFR3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC9.97□□□□□ -0.81
SPTSSBQ8NFR3 PCDHB19P-201ENST00000570871 2371 ntBASIC9.97□□□□□ -0.81
SPTSSBQ8NFR3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SPTSSBQ8NFR3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SPTSSBQ8NFR3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
SPTSSBQ8NFR3 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC9.97□□□□□ -0.81
SPTSSBQ8NFR3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
SPTSSBQ8NFR3 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC9.97□□□□□ -0.81
SPTSSBQ8NFR3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SPTSSBQ8NFR3 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
SPTSSBQ8NFR3 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC9.97□□□□□ -0.81
SPTSSBQ8NFR3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
SPTSSBQ8NFR3 AC126763.1-201ENST00000552015 2118 ntBASIC9.97□□□□□ -0.81
SPTSSBQ8NFR3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms