Protein–RNA interactions for Protein: Q8N5G0

SMIM20, Small integral membrane protein 20, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20Q8N5G0 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 AC011700.1-201ENST00000610409 2627 ntBASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
SMIM20Q8N5G0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 AC026691.1-201ENST00000602502 2017 ntBASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 AL603756.1-201ENST00000606511 2163 ntBASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
SMIM20Q8N5G0 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 AL157400.5-201ENST00000507624 621 ntBASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 AC093536.1-201ENST00000569153 554 ntBASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
SMIM20Q8N5G0 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms