Protein–RNA interactions for Protein: Q8N5G0

SMIM20, Small integral membrane protein 20, humanhuman

Predictions only

Length 67 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20Q8N5G0 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SMIM20Q8N5G0 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMIM20Q8N5G0 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SMIM20Q8N5G0 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
SMIM20Q8N5G0 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SMIM20Q8N5G0 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMIM20Q8N5G0 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SMIM20Q8N5G0 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC20.45■□□□□ 0.86
SMIM20Q8N5G0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMIM20Q8N5G0 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SMIM20Q8N5G0 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SMIM20Q8N5G0 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SMIM20Q8N5G0 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
SMIM20Q8N5G0 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SMIM20Q8N5G0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SMIM20Q8N5G0 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SMIM20Q8N5G0 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SMIM20Q8N5G0 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMIM20Q8N5G0 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SMIM20Q8N5G0 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMIM20Q8N5G0 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC19.76■□□□□ 0.75
SMIM20Q8N5G0 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM20Q8N5G0 AL161658.1-201ENST00000623641 1967 ntBASIC19.74■□□□□ 0.75
SMIM20Q8N5G0 AC139426.1-201ENST00000568218 2529 ntBASIC19.58■□□□□ 0.73
SMIM20Q8N5G0 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SMIM20Q8N5G0 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMIM20Q8N5G0 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SMIM20Q8N5G0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMIM20Q8N5G0 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SMIM20Q8N5G0 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SMIM20Q8N5G0 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SMIM20Q8N5G0 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SMIM20Q8N5G0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMIM20Q8N5G0 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMIM20Q8N5G0 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SMIM20Q8N5G0 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMIM20Q8N5G0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMIM20Q8N5G0 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMIM20Q8N5G0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMIM20Q8N5G0 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMIM20Q8N5G0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMIM20Q8N5G0 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SMIM20Q8N5G0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SMIM20Q8N5G0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC19.13■□□□□ 0.65
SMIM20Q8N5G0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SMIM20Q8N5G0 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SMIM20Q8N5G0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
SMIM20Q8N5G0 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SMIM20Q8N5G0 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC19.07■□□□□ 0.64
SMIM20Q8N5G0 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC19.07■□□□□ 0.64
SMIM20Q8N5G0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
SMIM20Q8N5G0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.05■□□□□ 0.64
SMIM20Q8N5G0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.05■□□□□ 0.64
SMIM20Q8N5G0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.03■□□□□ 0.64
SMIM20Q8N5G0 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SMIM20Q8N5G0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SMIM20Q8N5G0 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SMIM20Q8N5G0 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
SMIM20Q8N5G0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM20Q8N5G0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SMIM20Q8N5G0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SMIM20Q8N5G0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM20Q8N5G0 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
SMIM20Q8N5G0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM20Q8N5G0 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM20Q8N5G0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM20Q8N5G0 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SMIM20Q8N5G0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SMIM20Q8N5G0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SMIM20Q8N5G0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMIM20Q8N5G0 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SMIM20Q8N5G0 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM20Q8N5G0 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM20Q8N5G0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
SMIM20Q8N5G0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.69■□□□□ 0.58
SMIM20Q8N5G0 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM20Q8N5G0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM20Q8N5G0 AC135731.1-201ENST00000569415 2548 ntBASIC18.66■□□□□ 0.58
SMIM20Q8N5G0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM20Q8N5G0 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.64■□□□□ 0.57
SMIM20Q8N5G0 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SMIM20Q8N5G0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.64■□□□□ 0.57
SMIM20Q8N5G0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMIM20Q8N5G0 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
SMIM20Q8N5G0 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC18.52■□□□□ 0.56
SMIM20Q8N5G0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.52■□□□□ 0.56
SMIM20Q8N5G0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.51■□□□□ 0.55
SMIM20Q8N5G0 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM20Q8N5G0 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM20Q8N5G0 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC18.49■□□□□ 0.55
SMIM20Q8N5G0 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMIM20Q8N5G0 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC18.47■□□□□ 0.55
SMIM20Q8N5G0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM20Q8N5G0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SMIM20Q8N5G0 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SMIM20Q8N5G0 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SMIM20Q8N5G0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMIM20Q8N5G0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMIM20Q8N5G0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMIM20Q8N5G0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 753.1 ms