Protein–RNA interactions for Protein: P53999

SUB1, Activated RNA polymerase II transcriptional coactivator p15, humanhuman

Known RBP eCLIP

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P53999 RPL38-201ENST00000311111 1170 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.182e-16■□□□□ 8.3
SUB1P53999 MPP1-203ENST00000393529 794 ntTSL 56.42□□□□□ -1.389e-10■□□□□ 8.3
SUB1P53999 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.429e-10■□□□□ 8.3
SUB1P53999 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.58□□□□□ -1.842e-16■□□□□ 8.3
SUB1P53999 RPL18-207ENST00000549533 666 ntTSL 212.57□□□□□ -0.42e-18■□□□□ 8.2
SUB1P53999 RPS19-207ENST00000600467 420 ntTSL 216.2■□□□□ 0.181e-21■□□□□ 8.2
SUB1P53999 RPS19-204ENST00000598399 1172 ntTSL 59.51□□□□□ -0.891e-21■□□□□ 8.2
SUB1P53999 RPS19-205ENST00000598466 601 ntTSL 29.22□□□□□ -0.931e-21■□□□□ 8.2
SUB1P53999 RPS19-203ENST00000598261 307 ntTSL 38.98□□□□□ -0.971e-21■□□□□ 8.2
SUB1P53999 RPS19-208ENST00000601492 342 ntTSL 55.79□□□□□ -1.481e-21■□□□□ 8.2
SUB1P53999 ACTN4-211ENST00000589528 441 ntTSL 210.96□□□□□ -0.652e-6■□□□□ 8.2
SUB1P53999 IMPDH2-211ENST00000491610 844 ntTSL 57.76□□□□□ -1.177e-8■□□□□ 8.2
SUB1P53999 IMPDH2-204ENST00000462980 908 ntTSL 26.79□□□□□ -1.327e-8■□□□□ 8.2
SUB1P53999 WSB1-202ENST00000348811 1611 ntTSL 1 (best) BASIC9.88□□□□□ -0.832e-8■□□□□ 8.1
SUB1P53999 WSB1-201ENST00000262394 5139 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.932e-8■□□□□ 8.1
SUB1P53999 WSB1-204ENST00000467843 4187 ntTSL 1 (best)7.59□□□□□ -1.192e-8■□□□□ 8.1
SUB1P53999 WSB1-212ENST00000583096 834 ntTSL 32.96□□□□□ -1.942e-8■□□□□ 8.1
SUB1P53999 FLNA-212ENST00000466319 460 ntTSL 212.34□□□□□ -0.431e-9■□□□□ 8.1
SUB1P53999 CNN2-209ENST00000568865 1332 ntTSL 514.52□□□□□ -0.081e-10■□□□□ 8.1
SUB1P53999 EIF3B-203ENST00000413917 962 ntTSL 215.26■□□□□ 0.032e-8■□□□□ 8.1
SUB1P53999 BAG6-257ENST00000462875 972 ntTSL 213.32□□□□□ -0.282e-8■□□□□ 8.1
SUB1P53999 EIF3B-204ENST00000431643 1074 ntTSL 512.69□□□□□ -0.382e-8■□□□□ 8.1
SUB1P53999 BAG6-249ENST00000441793 783 ntTSL 29.14□□□□□ -0.952e-8■□□□□ 8.1
SUB1P53999 BAG6-238ENST00000422948 513 ntTSL 24.8□□□□□ -1.642e-8■□□□□ 8.1
SUB1P53999 EIF3B-206ENST00000463229 552 ntTSL 53.54□□□□□ -1.842e-8■□□□□ 8.1
SUB1P53999 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.02■□□□□ 0.643e-6■□□□□ 8.1
SUB1P53999 ACTN4-210ENST00000588618 1729 ntTSL 1 (best)17.83■□□□□ 0.443e-6■□□□□ 8.1
SUB1P53999 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.283e-6■□□□□ 8.1
SUB1P53999 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.013e-6■□□□□ 8.1
SUB1P53999 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 03e-6■□□□□ 8.1
SUB1P53999 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.043e-6■□□□□ 8.1
SUB1P53999 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.6□□□□□ -0.073e-6■□□□□ 8.1
SUB1P53999 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.093e-6■□□□□ 8.1
SUB1P53999 DUS1L-203ENST00000538833 1250 ntTSL 1 (best)13.26□□□□□ -0.293e-6■□□□□ 8.1
SUB1P53999 DUS1L-204ENST00000542088 1040 ntTSL 312.96□□□□□ -0.333e-6■□□□□ 8.1
SUB1P53999 DUS1L-213ENST00000580731 725 ntTSL 512.67□□□□□ -0.383e-6■□□□□ 8.1
SUB1P53999 GDI1-212ENST00000485143 579 ntTSL 412.5□□□□□ -0.413e-6■□□□□ 8.1
SUB1P53999 GDI1-211ENST00000481304 1014 ntTSL 1 (best)12.25□□□□□ -0.453e-6■□□□□ 8.1
SUB1P53999 GNB1-206ENST00000471354 1512 ntTSL 512.21□□□□□ -0.463e-6■□□□□ 8.1
SUB1P53999 DUS1L-210ENST00000578846 4456 ntTSL 212.04□□□□□ -0.483e-6■□□□□ 8.1
SUB1P53999 DUS1L-209ENST00000578428 688 ntTSL 212.02□□□□□ -0.493e-6■□□□□ 8.1
SUB1P53999 HNRNPL-211ENST00000601047 1127 ntTSL 511.43□□□□□ -0.583e-6■□□□□ 8.1
SUB1P53999 GNB1-205ENST00000461893 2438 ntTSL 211.37□□□□□ -0.593e-6■□□□□ 8.1
SUB1P53999 GDI1-202ENST00000434049 816 ntTSL 511.34□□□□□ -0.593e-6■□□□□ 8.1
SUB1P53999 GDI1-203ENST00000445564 568 ntTSL 411.34□□□□□ -0.593e-6■□□□□ 8.1
SUB1P53999 GDI1-209ENST00000475976 600 ntTSL 211.34□□□□□ -0.593e-6■□□□□ 8.1
SUB1P53999 HNRNPL-208ENST00000600233 659 ntTSL 511.26□□□□□ -0.613e-6■□□□□ 8.1
SUB1P53999 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC11.17□□□□□ -0.623e-6■□□□□ 8.1
SUB1P53999 DUS1L-205ENST00000577574 473 ntTSL 510.95□□□□□ -0.663e-6■□□□□ 8.1
SUB1P53999 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC10.75□□□□□ -0.693e-6■□□□□ 8.1
SUB1P53999 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC10.68□□□□□ -0.73e-6■□□□□ 8.1
SUB1P53999 HNRNPL-207ENST00000598985 900 ntTSL 510.68□□□□□ -0.73e-6■□□□□ 8.1
SUB1P53999 DUS1L-212ENST00000579854 657 ntTSL 210.65□□□□□ -0.73e-6■□□□□ 8.1
SUB1P53999 DUS1L-216ENST00000584871 676 ntTSL 210.15□□□□□ -0.783e-6■□□□□ 8.1
SUB1P53999 XPO1-214ENST00000461407 2676 ntTSL 210.13□□□□□ -0.793e-6■□□□□ 8.1
SUB1P53999 GDI1-201ENST00000415109 560 ntTSL 49.65□□□□□ -0.863e-6■□□□□ 8.1
SUB1P53999 RPL26-209ENST00000584164 873 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.873e-6■□□□□ 8.1
SUB1P53999 HNRNPL-214ENST00000601813 593 ntTSL 59.39□□□□□ -0.913e-6■□□□□ 8.1
SUB1P53999 RPL26-206ENST00000582556 763 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.973e-6■□□□□ 8.1
SUB1P53999 VRK1-204ENST00000555351 667 ntTSL 28.87□□□□□ -0.993e-6■□□□□ 8.1
SUB1P53999 RPL26-210ENST00000584343 747 ntTSL 58.06□□□□□ -1.123e-6■□□□□ 8.1
SUB1P53999 TMEM242-202ENST00000400788 4043 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.133e-6■□□□□ 8.1
SUB1P53999 PI4KA-212ENST00000484220 646 ntTSL 37.68□□□□□ -1.181e-11■□□□□ 8.1
SUB1P53999 GNB1-204ENST00000439272 602 ntTSL 57.34□□□□□ -1.233e-6■□□□□ 8.1
SUB1P53999 CD46-202ENST00000322918 3124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.253e-6■□□□□ 8.1
SUB1P53999 XPO1-222ENST00000492182 827 ntTSL 27.17□□□□□ -1.263e-6■□□□□ 8.1
SUB1P53999 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.323e-6■□□□□ 8.1
SUB1P53999 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.333e-6■□□□□ 8.1
SUB1P53999 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.343e-6■□□□□ 8.1
SUB1P53999 GNB1-202ENST00000434686 684 ntTSL 36.67□□□□□ -1.343e-6■□□□□ 8.1
SUB1P53999 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.353e-6■□□□□ 8.1
SUB1P53999 CD46-209ENST00000367047 3089 ntTSL 5 BASIC6.58□□□□□ -1.363e-6■□□□□ 8.1
SUB1P53999 CD46-212ENST00000469535 7826 ntTSL 1 (best)6.46□□□□□ -1.383e-6■□□□□ 8.1
SUB1P53999 PABPC4-221ENST00000525751 556 ntTSL 46.43□□□□□ -1.383e-6■□□□□ 8.1
SUB1P53999 PABPC4-223ENST00000529216 317 ntTSL 56.43□□□□□ -1.383e-6■□□□□ 8.1
SUB1P53999 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.413e-6■□□□□ 8.1
SUB1P53999 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.413e-6■□□□□ 8.1
SUB1P53999 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.423e-6■□□□□ 8.1
SUB1P53999 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.423e-6■□□□□ 8.1
SUB1P53999 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.423e-6■□□□□ 8.1
SUB1P53999 RPL26-208ENST00000583515 534 ntTSL 24.3□□□□□ -1.723e-6■□□□□ 8.1
SUB1P53999 PABPC4-210ENST00000470443 1212 ntTSL 54.18□□□□□ -1.743e-6■□□□□ 8.1
SUB1P53999 EPRS-205ENST00000485821 598 ntTSL 34.12□□□□□ -1.753e-6■□□□□ 8.1
SUB1P53999 RPL26-205ENST00000582485 443 ntTSL 34.12□□□□□ -1.753e-6■□□□□ 8.1
SUB1P53999 RPL26-202ENST00000578069 456 ntTSL 24.1□□□□□ -1.753e-6■□□□□ 8.1
SUB1P53999 RPL26-211ENST00000584441 328 ntTSL 34.04□□□□□ -1.763e-6■□□□□ 8.1
SUB1P53999 PABPC4-211ENST00000474378 591 ntTSL 53.9□□□□□ -1.793e-6■□□□□ 8.1
SUB1P53999 RPL26-213ENST00000585176 353 ntTSL 33.53□□□□□ -1.843e-6■□□□□ 8.1
SUB1P53999 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.37□□□□□ -1.873e-6■□□□□ 8.1
SUB1P53999 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.923e-6■□□□□ 8.1
SUB1P53999 RPL26-212ENST00000584906 561 ntTSL 33.05□□□□□ -1.923e-6■□□□□ 8.1
SUB1P53999 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.943e-6■□□□□ 8.1
SUB1P53999 PABPC4-217ENST00000492519 323 ntTSL 22.28□□□□□ -2.043e-6■□□□□ 8.1
SUB1P53999 CD46-219ENST00000636114 2098 ntTSL 52.1□□□□□ -2.073e-6■□□□□ 8.1
SUB1P53999 XPO1-223ENST00000494468 562 ntTSL 31.98□□□□□ -2.093e-6■□□□□ 8.1
SUB1P53999 CD46-210ENST00000462968 473 ntTSL 31.72□□□□□ -2.133e-6■□□□□ 8.1
SUB1P53999 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC19.83■□□□□ 0.773e-6■□□□□ 8
SUB1P53999 ISYNA1-204ENST00000577916 2148 ntTSL 519.79■□□□□ 0.763e-6■□□□□ 8
SUB1P53999 IRAK1-201ENST00000369973 2358 ntTSL 519.71■□□□□ 0.753e-6■□□□□ 8
SUB1P53999 EDC4-204ENST00000572221 5267 ntTSL 218.78■□□□□ 0.63e-6■□□□□ 8
Retrieved 100 of 11,644 protein–RNA pairs in 349.1 ms