RNA–Protein interactions for RNA: ENST00000463229.2

EIF3B-206, Transcript of eukaryotic translation initiation factor 3 subunit B, humanhuman

TSL 5

Gene EIF3B, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3B-206ENST00000463229 CHIC1Q5VXU3 224 aa17.25■□□□□ 0.35
EIF3B-206ENST00000463229 AEBP2Q6ZN18 517 aaPredicted RBP17.06■□□□□ 0.32
EIF3B-206ENST00000463229 PHF23Q9BUL5 403 aaPredicted RBP15.16■□□□□ 0.02
EIF3B-206ENST00000463229 SENP3Q9H4L4 574 aaPredicted RBP14.53□□□□□ -0.08
EIF3B-206ENST00000463229 PLPPR3Q6T4P5 718 aa14.3□□□□□ -0.12
EIF3B-206ENST00000463229 FOXD1Q16676 465 aa13.33□□□□□ -0.28
EIF3B-206ENST00000463229 ADRA2BP18089 450 aa13.25□□□□□ -0.29
EIF3B-206ENST00000463229 PPP6R1Q9UPN7 881 aa13.19□□□□□ -0.3
EIF3B-206ENST00000463229 KCNA4P22459 653 aa12.88□□□□□ -0.35
EIF3B-206ENST00000463229 PIAS4Q8N2W9 510 aaPredicted RBP12.77□□□□□ -0.37
EIF3B-206ENST00000463229 EHMT2Q96KQ7 1210 aa12.64□□□□□ -0.39
EIF3B-206ENST00000463229 PPP4R3CPQ6ZMV5 832 aa12.63□□□□□ -0.39
EIF3B-206ENST00000463229 NCBP3Q53F19 620 aaKnown RBP12.54□□□□□ -0.4
EIF3B-206ENST00000463229 SLC4A1APQ9BWU0 796 aaKnown RBP12.44□□□□□ -0.42
EIF3B-206ENST00000463229 SCAF1Q9H7N4 1312 aaKnown RBP12.28□□□□□ -0.44
EIF3B-206ENST00000463229 NPM3O75607 178 aaKnown RBP12.24□□□□□ -0.45
EIF3B-206ENST00000463229 CSRNP3Q8WYN3 585 aa12.21□□□□□ -0.45
EIF3B-206ENST00000463229 MSH5O43196 834 aa12.2□□□□□ -0.46
EIF3B-206ENST00000463229 CNKSR2Q8WXI2 1034 aa12.2□□□□□ -0.46
EIF3B-206ENST00000463229 MAPK8IP2Q13387 824 aaPredicted RBP11.84□□□□□ -0.51
EIF3B-206ENST00000463229 DNAJC5BQ9UF47 199 aa11.83□□□□□ -0.52
EIF3B-206ENST00000463229 ZBTB22O15209 634 aa11.81□□□□□ -0.52
EIF3B-206ENST00000463229 RNF216Q9NWF9 866 aaPredicted RBP11.81□□□□□ -0.52
EIF3B-206ENST00000463229 FOXD4L1Q9NU39 408 aa11.78□□□□□ -0.52
EIF3B-206ENST00000463229 DMRT2Q9Y5R5 561 aa11.64□□□□□ -0.55
EIF3B-206ENST00000463229 HOXD11P31277 338 aaPredicted RBP11.6□□□□□ -0.55
EIF3B-206ENST00000463229 SLC4A2P04920 1241 aa11.4□□□□□ -0.58
EIF3B-206ENST00000463229 MYCNP04198 464 aaPredicted RBP11.37□□□□□ -0.59
EIF3B-206ENST00000463229 ATXN8OSP0DMR3 200 aa11.35□□□□□ -0.59
EIF3B-206ENST00000463229 DCAF8L1A6NGE4 600 aa11.16□□□□□ -0.62
EIF3B-206ENST00000463229 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.12□□□□□ -0.637e-10■■□□□ 13.9
EIF3B-206ENST00000463229 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.1□□□□□ -0.63
EIF3B-206ENST00000463229 HNRNPUL2Q1KMD3 747 aaKnown RBP11.1□□□□□ -0.63
EIF3B-206ENST00000463229 FKBP8Q14318 412 aa11.07□□□□□ -0.64
EIF3B-206ENST00000463229 AMER1Q5JTC6 1135 aaPredicted RBP11.06□□□□□ -0.64
EIF3B-206ENST00000463229 SAMD1Q6SPF0 538 aaPredicted RBP11.05□□□□□ -0.64
EIF3B-206ENST00000463229 RTN4Q9NQC3 1192 aaKnown RBP10.95□□□□□ -0.66
EIF3B-206ENST00000463229 U3KPZ7 1027 aaPredicted RBP10.92□□□□□ -0.66
EIF3B-206ENST00000463229 APLP2Q06481 763 aa10.9□□□□□ -0.66
EIF3B-206ENST00000463229 ATF5Q9Y2D1 282 aaPredicted RBP10.9□□□□□ -0.66
EIF3B-206ENST00000463229 SLC24A1O60721 1099 aa10.81□□□□□ -0.68
EIF3B-206ENST00000463229 ZNF219Q9P2Y4 722 aaPredicted RBP10.76□□□□□ -0.69
EIF3B-206ENST00000463229 FBXO3Q9UK99 471 aa10.62□□□□□ -0.71
EIF3B-206ENST00000463229 FBLN2P98095 1184 aa10.58□□□□□ -0.72
EIF3B-206ENST00000463229 SPDYE4A6NLX3 237 aa10.57□□□□□ -0.72
EIF3B-206ENST00000463229 NISCHQ9Y2I1 1504 aa10.53□□□□□ -0.72
EIF3B-206ENST00000463229 TRHP20396 242 aaPredicted RBP10.52□□□□□ -0.73
EIF3B-206ENST00000463229 MKRN4PQ13434 485 aaPredicted RBP10.47□□□□□ -0.73
EIF3B-206ENST00000463229 CAPN15O75808 1086 aa10.46□□□□□ -0.73
EIF3B-206ENST00000463229 POLA2Q14181 598 aa10.45□□□□□ -0.74
EIF3B-206ENST00000463229 SPINK5Q9NQ38 1064 aaPredicted RBP10.44□□□□□ -0.74
EIF3B-206ENST00000463229 RNF39Q9H2S5 420 aa10.43□□□□□ -0.74
EIF3B-206ENST00000463229 PROM2Q8N271 834 aa10.41□□□□□ -0.74
EIF3B-206ENST00000463229 ZBTB12Q9Y330 459 aaPredicted RBP10.41□□□□□ -0.74
EIF3B-206ENST00000463229 C1QBPQ07021 282 aaKnown RBP10.39□□□□□ -0.75
EIF3B-206ENST00000463229 VASPP50552 380 aaPredicted RBP10.38□□□□□ -0.75
EIF3B-206ENST00000463229 ABCB7O75027 752 aa10.26□□□□□ -0.77
EIF3B-206ENST00000463229 IFNLR1Q8IU57 520 aaPredicted RBP10.23□□□□□ -0.77
EIF3B-206ENST00000463229 DCAF8L2P0C7V8 631 aa10.19□□□□□ -0.78
EIF3B-206ENST00000463229 PLCB2Q00722 1185 aa10.16□□□□□ -0.78
EIF3B-206ENST00000463229 ZNF692Q9BU19 519 aaPredicted RBP10.16□□□□□ -0.78
EIF3B-206ENST00000463229 STAG3Q9UJ98 1225 aa10.16□□□□□ -0.78
EIF3B-206ENST00000463229 KLHL34Q8N239 644 aa10.14□□□□□ -0.79
EIF3B-206ENST00000463229 SPDYE2BA6NHP3 402 aa10.12□□□□□ -0.79
EIF3B-206ENST00000463229 SPDYE6P0CI01 402 aa10.12□□□□□ -0.79
EIF3B-206ENST00000463229 SPDYE2Q495Y8 402 aa10.12□□□□□ -0.79
EIF3B-206ENST00000463229 SPOCK2Q92563 424 aa10.11□□□□□ -0.79
EIF3B-206ENST00000463229 DSG3P32926 999 aa10.1□□□□□ -0.79
EIF3B-206ENST00000463229 POTEDQ86YR6 584 aa10.1□□□□□ -0.79
EIF3B-206ENST00000463229 PKD2Q13563 968 aa10.08□□□□□ -0.8
EIF3B-206ENST00000463229 OSCARQ8IYS5 282 aa10.06□□□□□ -0.8
EIF3B-206ENST00000463229 PLCD3Q8N3E9 789 aa10.06□□□□□ -0.8
EIF3B-206ENST00000463229 SSUH2Q9Y2M2 353 aa10.05□□□□□ -0.8
EIF3B-206ENST00000463229 HAP1P54257 671 aaPredicted RBP10.04□□□□□ -0.8
EIF3B-206ENST00000463229 PABPN1Q86U42 306 aaKnown RBP eCLIP10.02□□□□□ -0.81
EIF3B-206ENST00000463229 ECM2O94769 699 aaPredicted RBP10.01□□□□□ -0.81
EIF3B-206ENST00000463229 PLEKHG5O94827 1062 aa10.01□□□□□ -0.81
EIF3B-206ENST00000463229 MIER1Q8N108 512 aa10□□□□□ -0.81
EIF3B-206ENST00000463229 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.99□□□□□ -0.81
EIF3B-206ENST00000463229 ZBTB47Q9UFB7 747 aaPredicted RBP9.97□□□□□ -0.81
EIF3B-206ENST00000463229 BBXQ8WY36 941 aaPredicted RBP9.93□□□□□ -0.82
EIF3B-206ENST00000463229 VSIG10Q8N0Z9 540 aa9.91□□□□□ -0.82
EIF3B-206ENST00000463229 BCANQ96GW7 911 aa9.86□□□□□ -0.83
EIF3B-206ENST00000463229 CIZ1Q9ULV3 898 aaPredicted RBP9.86□□□□□ -0.83
EIF3B-206ENST00000463229 TRIM41Q8WV44 630 aa9.84□□□□□ -0.83
EIF3B-206ENST00000463229 RGL2O15211 777 aa9.83□□□□□ -0.84
EIF3B-206ENST00000463229 CACNB1Q02641 598 aaPredicted RBP9.83□□□□□ -0.84
EIF3B-206ENST00000463229 PAXIP1Q6ZW49 1069 aaPredicted RBP9.83□□□□□ -0.84
EIF3B-206ENST00000463229 CFAP44Q96MT7 982 aa9.82□□□□□ -0.84
EIF3B-206ENST00000463229 NPM1P06748 294 aaKnown RBP eCLIP9.79□□□□□ -0.84
EIF3B-206ENST00000463229 SPRYD3Q8NCJ5 442 aa9.78□□□□□ -0.84
EIF3B-206ENST00000463229 GSE1Q14687 1217 aa9.76□□□□□ -0.85
EIF3B-206ENST00000463229 CHGAP10645 457 aaKnown RBP9.74□□□□□ -0.85
EIF3B-206ENST00000463229 SPDYE1Q8NFV5 336 aaPredicted RBP9.72□□□□□ -0.85
EIF3B-206ENST00000463229 RBM42Q9BTD8 480 aaKnown RBP9.72□□□□□ -0.85
EIF3B-206ENST00000463229 TAOK2Q9UL54 1235 aa9.71□□□□□ -0.86
EIF3B-206ENST00000463229 AKT1S1Q96B36 256 aa9.67□□□□□ -0.86
EIF3B-206ENST00000463229 DCAF8Q5TAQ9 597 aa9.66□□□□□ -0.86
EIF3B-206ENST00000463229 HS6ST3Q8IZP7 471 aa9.66□□□□□ -0.86
EIF3B-206ENST00000463229 KDM2AQ9Y2K7 1162 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms