RNA–Protein interactions for RNA: ENST00000474378.1

PABPC4-211, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-211ENST00000474378 AEBP2Q6ZN18 517 aaPredicted RBP14.62□□□□□ -0.07
PABPC4-211ENST00000474378 CHIC1Q5VXU3 224 aa14.56□□□□□ -0.08
PABPC4-211ENST00000474378 PHF23Q9BUL5 403 aaPredicted RBP12.88□□□□□ -0.35
PABPC4-211ENST00000474378 SENP3Q9H4L4 574 aaPredicted RBP12.3□□□□□ -0.44
PABPC4-211ENST00000474378 NISCHQ9Y2I1 1504 aa12□□□□□ -0.49
PABPC4-211ENST00000474378 PLPPR3Q6T4P5 718 aa11.96□□□□□ -0.49
PABPC4-211ENST00000474378 FOXD1Q16676 465 aa11.42□□□□□ -0.58
PABPC4-211ENST00000474378 ADRA2BP18089 450 aa11.27□□□□□ -0.61
PABPC4-211ENST00000474378 PPP6R1Q9UPN7 881 aa11.26□□□□□ -0.61
PABPC4-211ENST00000474378 PIAS4Q8N2W9 510 aaPredicted RBP10.83□□□□□ -0.68
PABPC4-211ENST00000474378 KCNA4P22459 653 aa10.75□□□□□ -0.69
PABPC4-211ENST00000474378 CCDC180Q9P1Z9 1646 aa10.66□□□□□ -0.7
PABPC4-211ENST00000474378 PPP4R3CPQ6ZMV5 832 aa10.6□□□□□ -0.71
PABPC4-211ENST00000474378 NCBP3Q53F19 620 aaKnown RBP10.38□□□□□ -0.75
PABPC4-211ENST00000474378 EHMT2Q96KQ7 1210 aa10.38□□□□□ -0.75
PABPC4-211ENST00000474378 MSH5O43196 834 aa10.35□□□□□ -0.75
PABPC4-211ENST00000474378 NPM3O75607 178 aaKnown RBP10.28□□□□□ -0.76
PABPC4-211ENST00000474378 SLC4A1APQ9BWU0 796 aaKnown RBP10.27□□□□□ -0.77
PABPC4-211ENST00000474378 SCAF1Q9H7N4 1312 aaKnown RBP10.24□□□□□ -0.77
PABPC4-211ENST00000474378 CNKSR2Q8WXI2 1034 aa10.21□□□□□ -0.77
PABPC4-211ENST00000474378 MAPK8IP2Q13387 824 aaPredicted RBP10.14□□□□□ -0.79
PABPC4-211ENST00000474378 ZCCHC6Q5VYS8 1495 aaKnown RBP10.11□□□□□ -0.79
PABPC4-211ENST00000474378 CSRNP3Q8WYN3 585 aa10.11□□□□□ -0.79
PABPC4-211ENST00000474378 DCAF1Q9Y4B6 1507 aa10.04□□□□□ -0.8
PABPC4-211ENST00000474378 MYO15BQ96JP2 1530 aa10.01□□□□□ -0.81
PABPC4-211ENST00000474378 ABCC9O60706 1549 aa9.97□□□□□ -0.81
PABPC4-211ENST00000474378 RNF216Q9NWF9 866 aaPredicted RBP9.93□□□□□ -0.82
PABPC4-211ENST00000474378 ZBTB22O15209 634 aa9.9□□□□□ -0.82
PABPC4-211ENST00000474378 NACADO15069 1562 aa9.89□□□□□ -0.83
PABPC4-211ENST00000474378 DMRT2Q9Y5R5 561 aa9.89□□□□□ -0.83
PABPC4-211ENST00000474378 DNAJC5BQ9UF47 199 aa9.87□□□□□ -0.83
PABPC4-211ENST00000474378 RB1CC1Q8TDY2 1594 aa9.82□□□□□ -0.84
PABPC4-211ENST00000474378 HOXD11P31277 338 aaPredicted RBP9.8□□□□□ -0.84
PABPC4-211ENST00000474378 FOXD4L1Q9NU39 408 aa9.76□□□□□ -0.85
PABPC4-211ENST00000474378 UNC13AQ9UPW8 1703 aa9.63□□□□□ -0.87
PABPC4-211ENST00000474378 SLC4A2P04920 1241 aa9.63□□□□□ -0.87
PABPC4-211ENST00000474378 SCRIBQ14160 1630 aa9.61□□□□□ -0.87
PABPC4-211ENST00000474378 SHROOM4Q9ULL8 1493 aa9.57□□□□□ -0.88
PABPC4-211ENST00000474378 DCAF8L2P0C7V8 631 aa9.56□□□□□ -0.88
PABPC4-211ENST00000474378 BICRAQ9NZM4 1560 aa9.54□□□□□ -0.88
PABPC4-211ENST00000474378 MYCNP04198 464 aaPredicted RBP9.46□□□□□ -0.9
PABPC4-211ENST00000474378 DCAF8L1A6NGE4 600 aa9.45□□□□□ -0.9
PABPC4-211ENST00000474378 ATXN8OSP0DMR3 200 aa9.36□□□□□ -0.91
PABPC4-211ENST00000474378 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.34□□□□□ -0.91
PABPC4-211ENST00000474378 BAZ1AQ9NRL2 1556 aaPredicted RBP9.3□□□□□ -0.92
PABPC4-211ENST00000474378 SMARCA4P51532 1647 aa9.28□□□□□ -0.92
PABPC4-211ENST00000474378 PEG3Q9GZU2 1588 aa9.27□□□□□ -0.93
PABPC4-211ENST00000474378 U3KPZ7 1027 aaPredicted RBP9.26□□□□□ -0.93
PABPC4-211ENST00000474378 CECR2Q9BXF3 1484 aa9.26□□□□□ -0.93
PABPC4-211ENST00000474378 EIF4G1Q04637 1599 aaKnown RBP9.25□□□□□ -0.93
PABPC4-211ENST00000474378 PABPN1Q86U42 306 aaKnown RBP eCLIP9.25□□□□□ -0.93
PABPC4-211ENST00000474378 ATF5Q9Y2D1 282 aaPredicted RBP9.24□□□□□ -0.93
PABPC4-211ENST00000474378 MROH2BQ7Z745 1585 aa9.23□□□□□ -0.93
PABPC4-211ENST00000474378 RSF1Q96T23 1441 aaPredicted RBP9.2□□□□□ -0.94
PABPC4-211ENST00000474378 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.19□□□□□ -0.94
PABPC4-211ENST00000474378 HNRNPUL2Q1KMD3 747 aaKnown RBP9.19□□□□□ -0.94
PABPC4-211ENST00000474378 SAMD1Q6SPF0 538 aaPredicted RBP9.18□□□□□ -0.94
PABPC4-211ENST00000474378 SMARCA2P51531 1590 aa9.16□□□□□ -0.94
PABPC4-211ENST00000474378 HMGXB3Q12766 1538 aa9.15□□□□□ -0.94
PABPC4-211ENST00000474378 ATAD2BQ9ULI0 1458 aa9.13□□□□□ -0.95
PABPC4-211ENST00000474378 WIZO95785 1651 aa9.13□□□□□ -0.95
PABPC4-211ENST00000474378 TOP2AP11388 1531 aaKnown RBP9.11□□□□□ -0.95
PABPC4-211ENST00000474378 FKBP8Q14318 412 aa9.11□□□□□ -0.95
PABPC4-211ENST00000474378 CC2D2AQ9P2K1 1620 aa9.11□□□□□ -0.95
PABPC4-211ENST00000474378 NCAPD3P42695 1498 aa9.1□□□□□ -0.95
PABPC4-211ENST00000474378 BAZ1BQ9UIG0 1483 aaKnown RBP9.05□□□□□ -0.96
PABPC4-211ENST00000474378 ZNF219Q9P2Y4 722 aaPredicted RBP9.01□□□□□ -0.97
PABPC4-211ENST00000474378 APLP2Q06481 763 aa9□□□□□ -0.97
PABPC4-211ENST00000474378 CCDC88BA6NC98 1476 aa8.92□□□□□ -0.98
PABPC4-211ENST00000474378 SUPT5HO00267 1087 aaKnown RBP8.92□□□□□ -0.98
PABPC4-211ENST00000474378 RNF39Q9H2S5 420 aa8.92□□□□□ -0.98
PABPC4-211ENST00000474378 SPINK5Q9NQ38 1064 aaPredicted RBP8.91□□□□□ -0.98
PABPC4-211ENST00000474378 PRDM2Q13029 1718 aa8.89□□□□□ -0.99
PABPC4-211ENST00000474378 TRHP20396 242 aaPredicted RBP8.89□□□□□ -0.99
PABPC4-211ENST00000474378 POTEDQ86YR6 584 aa8.89□□□□□ -0.99
PABPC4-211ENST00000474378 RTN4Q9NQC3 1192 aaKnown RBP8.88□□□□□ -0.99
PABPC4-211ENST00000474378 CFTRP13569 1480 aa8.85□□□□□ -0.99
PABPC4-211ENST00000474378 LAMC3Q9Y6N6 1575 aa8.85□□□□□ -0.99
PABPC4-211ENST00000474378 CAPN15O75808 1086 aa8.84□□□□□ -0.99
PABPC4-211ENST00000474378 MKRN4PQ13434 485 aaPredicted RBP8.84□□□□□ -0.99
PABPC4-211ENST00000474378 AMER1Q5JTC6 1135 aaPredicted RBP8.84□□□□□ -0.99
PABPC4-211ENST00000474378 C1QBPQ07021 282 aaKnown RBP8.81□□□□□ -1
PABPC4-211ENST00000474378 POLA2Q14181 598 aa8.81□□□□□ -1
PABPC4-211ENST00000474378 CADPSQ9ULU8 1353 aa8.79□□□□□ -1
PABPC4-211ENST00000474378 SPDYE4A6NLX3 237 aa8.77□□□□□ -1.01
PABPC4-211ENST00000474378 FBLN2P98095 1184 aa8.76□□□□□ -1.01
PABPC4-211ENST00000474378 NESP48681 1621 aa8.73□□□□□ -1.01
PABPC4-211ENST00000474378 ABCB7O75027 752 aa8.72□□□□□ -1.01
PABPC4-211ENST00000474378 BIVM-ERCC5R4GMW8 1640 aa8.71□□□□□ -1.02
PABPC4-211ENST00000474378 KIF21AQ7Z4S6 1674 aa8.71□□□□□ -1.02
PABPC4-211ENST00000474378 FANCD2Q9BXW9 1451 aa8.7□□□□□ -1.02
PABPC4-211ENST00000474378 PDS5BQ9NTI5 1447 aa8.69□□□□□ -1.02
PABPC4-211ENST00000474378 CEP164Q9UPV0 1460 aa8.69□□□□□ -1.02
PABPC4-211ENST00000474378 TOP2BQ02880 1626 aa8.69□□□□□ -1.02
PABPC4-211ENST00000474378 SYNJ1O43426 1573 aa8.68□□□□□ -1.02
PABPC4-211ENST00000474378 THOC2Q8NI27 1593 aaKnown RBP8.68□□□□□ -1.02
PABPC4-211ENST00000474378 ABCC8Q09428 1581 aa8.67□□□□□ -1.02
PABPC4-211ENST00000474378 DNMBPQ6XZF7 1577 aa8.67□□□□□ -1.02
PABPC4-211ENST00000474378 PROM2Q8N271 834 aa8.67□□□□□ -1.02
PABPC4-211ENST00000474378 WDR62O43379 1518 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms