RNA–Protein interactions for RNA: ENST00000525751.5

PABPC4-221, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 4

Gene PABPC4, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-221ENST00000525751 NISCHQ9Y2I1 1504 aa19.31■□□□□ 0.68
PABPC4-221ENST00000525751 AEBP2Q6ZN18 517 aaPredicted RBP18.24■□□□□ 0.51
PABPC4-221ENST00000525751 CHIC1Q5VXU3 224 aa17.39■□□□□ 0.37
PABPC4-221ENST00000525751 CCDC180Q9P1Z9 1646 aa17.02■□□□□ 0.31
PABPC4-221ENST00000525751 ABCC9O60706 1549 aa16.29■□□□□ 0.2
PABPC4-221ENST00000525751 ZCCHC6Q5VYS8 1495 aaKnown RBP16.19■□□□□ 0.18
PABPC4-221ENST00000525751 DCAF1Q9Y4B6 1507 aa16.04■□□□□ 0.16
PABPC4-221ENST00000525751 MYO15BQ96JP2 1530 aa15.99■□□□□ 0.15
PABPC4-221ENST00000525751 NACADO15069 1562 aa15.92■□□□□ 0.14
PABPC4-221ENST00000525751 DCAF8L2P0C7V8 631 aa15.9■□□□□ 0.14
PABPC4-221ENST00000525751 RB1CC1Q8TDY2 1594 aa15.85■□□□□ 0.13
PABPC4-221ENST00000525751 SENP3Q9H4L4 574 aaPredicted RBP15.58■□□□□ 0.08
PABPC4-221ENST00000525751 SCRIBQ14160 1630 aa15.53■□□□□ 0.08
PABPC4-221ENST00000525751 SHROOM4Q9ULL8 1493 aa15.41■□□□□ 0.06
PABPC4-221ENST00000525751 UNC13AQ9UPW8 1703 aa15.4■□□□□ 0.06
PABPC4-221ENST00000525751 PHF23Q9BUL5 403 aaPredicted RBP15.35■□□□□ 0.05
PABPC4-221ENST00000525751 BICRAQ9NZM4 1560 aa15.34■□□□□ 0.05
PABPC4-221ENST00000525751 PABPN1Q86U42 306 aaKnown RBP eCLIP15.25■□□□□ 0.03
PABPC4-221ENST00000525751 CECR2Q9BXF3 1484 aa14.98□□□□□ -0.01
PABPC4-221ENST00000525751 BAZ1AQ9NRL2 1556 aaPredicted RBP14.95□□□□□ -0.02
PABPC4-221ENST00000525751 EIF4G1Q04637 1599 aaKnown RBP14.92□□□□□ -0.02
PABPC4-221ENST00000525751 SMARCA4P51532 1647 aa14.9□□□□□ -0.02
PABPC4-221ENST00000525751 MROH2BQ7Z745 1585 aa14.88□□□□□ -0.03
PABPC4-221ENST00000525751 RSF1Q96T23 1441 aaPredicted RBP14.84□□□□□ -0.03
PABPC4-221ENST00000525751 PEG3Q9GZU2 1588 aa14.79□□□□□ -0.04
PABPC4-221ENST00000525751 SMARCA2P51531 1590 aa14.76□□□□□ -0.05
PABPC4-221ENST00000525751 ATAD2BQ9ULI0 1458 aa14.75□□□□□ -0.05
PABPC4-221ENST00000525751 CC2D2AQ9P2K1 1620 aa14.74□□□□□ -0.05
PABPC4-221ENST00000525751 WIZO95785 1651 aa14.7□□□□□ -0.06
PABPC4-221ENST00000525751 NCAPD3P42695 1498 aa14.69□□□□□ -0.06
PABPC4-221ENST00000525751 HMGXB3Q12766 1538 aa14.67□□□□□ -0.06
PABPC4-221ENST00000525751 SUPT5HO00267 1087 aaKnown RBP14.67□□□□□ -0.06
PABPC4-221ENST00000525751 BAZ1BQ9UIG0 1483 aaKnown RBP14.64□□□□□ -0.07
PABPC4-221ENST00000525751 TOP2AP11388 1531 aaKnown RBP14.62□□□□□ -0.07
PABPC4-221ENST00000525751 DNAJC5BQ9UF47 199 aa14.6□□□□□ -0.07
PABPC4-221ENST00000525751 FOXD1Q16676 465 aa14.48□□□□□ -0.09
PABPC4-221ENST00000525751 CCDC88BA6NC98 1476 aa14.43□□□□□ -0.1
PABPC4-221ENST00000525751 CFTRP13569 1480 aa14.28□□□□□ -0.12
PABPC4-221ENST00000525751 CADPSQ9ULU8 1353 aa14.27□□□□□ -0.12
PABPC4-221ENST00000525751 LAMC3Q9Y6N6 1575 aa14.25□□□□□ -0.13
PABPC4-221ENST00000525751 NESP48681 1621 aa14.19□□□□□ -0.14
PABPC4-221ENST00000525751 PDS5BQ9NTI5 1447 aa14.14□□□□□ -0.15
PABPC4-221ENST00000525751 PRDM2Q13029 1718 aa14.12□□□□□ -0.15
PABPC4-221ENST00000525751 FANCD2Q9BXW9 1451 aa14.11□□□□□ -0.15
PABPC4-221ENST00000525751 CEP164Q9UPV0 1460 aa14.06□□□□□ -0.16
PABPC4-221ENST00000525751 ERCC6Q03468 1493 aa14.03□□□□□ -0.16
PABPC4-221ENST00000525751 KIF21AQ7Z4S6 1674 aa14.01□□□□□ -0.17
PABPC4-221ENST00000525751 WRNQ14191 1432 aaPredicted RBP eCLIP13.99□□□□□ -0.17
PABPC4-221ENST00000525751 ABCC8Q09428 1581 aa13.98□□□□□ -0.17
PABPC4-221ENST00000525751 MRC2Q9UBG0 1479 aa13.98□□□□□ -0.17
PABPC4-221ENST00000525751 URB2Q14146 1524 aaKnown RBP13.95□□□□□ -0.18
PABPC4-221ENST00000525751 DNMBPQ6XZF7 1577 aa13.94□□□□□ -0.18
PABPC4-221ENST00000525751 CUX1P39880 1505 aa13.94□□□□□ -0.18
PABPC4-221ENST00000525751 THOC2Q8NI27 1593 aaKnown RBP13.93□□□□□ -0.18
PABPC4-221ENST00000525751 PLPPR3Q6T4P5 718 aa13.93□□□□□ -0.18
PABPC4-221ENST00000525751 SYNJ1O43426 1573 aa13.92□□□□□ -0.18
PABPC4-221ENST00000525751 WDR62O43379 1518 aa13.92□□□□□ -0.18
PABPC4-221ENST00000525751 TOPBP1Q92547 1522 aa13.92□□□□□ -0.18
PABPC4-221ENST00000525751 TOP2BQ02880 1626 aa13.92□□□□□ -0.18
PABPC4-221ENST00000525751 BIVM-ERCC5R4GMW8 1640 aa13.9□□□□□ -0.18
PABPC4-221ENST00000525751 TRIM41Q8WV44 630 aa13.86□□□□□ -0.19
PABPC4-221ENST00000525751 FGD5Q6ZNL6 1462 aa13.84□□□□□ -0.19
PABPC4-221ENST00000525751 POLA1P09884 1462 aaPredicted RBP13.83□□□□□ -0.2
PABPC4-221ENST00000525751 CUX2O14529 1486 aa13.78□□□□□ -0.2
PABPC4-221ENST00000525751 IFT140Q96RY7 1462 aa13.76□□□□□ -0.21
PABPC4-221ENST00000525751 SOGA1O94964 1423 aa13.76□□□□□ -0.21
PABPC4-221ENST00000525751 ABCA10Q8WWZ4 1543 aa13.74□□□□□ -0.21
PABPC4-221ENST00000525751 RAD54L2Q9Y4B4 1467 aa13.74□□□□□ -0.21
PABPC4-221ENST00000525751 TARBP1Q13395 1621 aaKnown RBP13.73□□□□□ -0.21
PABPC4-221ENST00000525751 WDR97A6NE52 1622 aa13.7□□□□□ -0.22
PABPC4-221ENST00000525751 EEA1Q15075 1411 aa13.67□□□□□ -0.22
PABPC4-221ENST00000525751 KIF27Q86VH2 1401 aa13.67□□□□□ -0.22
PABPC4-221ENST00000525751 ABCA5Q8WWZ7 1642 aa13.64□□□□□ -0.23
PABPC4-221ENST00000525751 ZNF608Q9ULD9 1512 aaPredicted RBP13.64□□□□□ -0.23
PABPC4-221ENST00000525751 TDRD9Q8NDG6 1382 aaKnown RBP13.63□□□□□ -0.23
PABPC4-221ENST00000525751 EIF4G3O43432 1585 aaKnown RBP13.62□□□□□ -0.23
PABPC4-221ENST00000525751 GAPVD1Q14C86 1478 aa13.61□□□□□ -0.23
PABPC4-221ENST00000525751 RUSC2Q8N2Y8 1516 aa13.61□□□□□ -0.23
PABPC4-221ENST00000525751 AQRO60306 1485 aaKnown RBP eCLIP13.6□□□□□ -0.232e-8■■■■■ 45.1
PABPC4-221ENST00000525751 ERICH3Q5RHP9 1530 aa13.59□□□□□ -0.23
PABPC4-221ENST00000525751 PIAS4Q8N2W9 510 aaPredicted RBP13.58□□□□□ -0.24
PABPC4-221ENST00000525751 GRIN2BQ13224 1484 aa13.58□□□□□ -0.24
PABPC4-221ENST00000525751 PPP6R1Q9UPN7 881 aa13.57□□□□□ -0.24
PABPC4-221ENST00000525751 MSH5O43196 834 aa13.56□□□□□ -0.24
PABPC4-221ENST00000525751 IGF1RP08069 1367 aa13.56□□□□□ -0.24
PABPC4-221ENST00000525751 ADRA2BP18089 450 aa13.54□□□□□ -0.24
PABPC4-221ENST00000525751 CSRNP3Q8WYN3 585 aa13.54□□□□□ -0.24
PABPC4-221ENST00000525751 PBRM1Q86U86 1689 aa13.53□□□□□ -0.24
PABPC4-221ENST00000525751 FAM9AQ8IZU1 332 aaPredicted RBP13.52□□□□□ -0.25
PABPC4-221ENST00000525751 MAGI1Q96QZ7 1491 aaPredicted RBP13.52□□□□□ -0.25
PABPC4-221ENST00000525751 CUL7Q14999 1698 aa13.51□□□□□ -0.25
PABPC4-221ENST00000525751 SNAPC4Q5SXM2 1469 aa13.51□□□□□ -0.25
PABPC4-221ENST00000525751 PRXQ9BXM0 1461 aa13.51□□□□□ -0.25
PABPC4-221ENST00000525751 ADAMTS12P58397 1594 aa13.49□□□□□ -0.25
PABPC4-221ENST00000525751 FHAD1B1AJZ9 1412 aa13.49□□□□□ -0.25
PABPC4-221ENST00000525751 CARMIL1Q5VZK9 1371 aa13.48□□□□□ -0.25
PABPC4-221ENST00000525751 KIF21BO75037 1637 aa13.47□□□□□ -0.25
PABPC4-221ENST00000525751 SYNJ2O15056 1496 aa13.46□□□□□ -0.25
PABPC4-221ENST00000525751 RAPGEF2Q9Y4G8 1499 aa13.46□□□□□ -0.25
PABPC4-221ENST00000525751 GOLGA3Q08378 1498 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms