RNA–Protein interactions for RNA: ENST00000492519.1

PABPC4-217, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 2

Gene PABPC4, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-217ENST00000492519 AEBP2Q6ZN18 517 aaPredicted RBP15.59■□□□□ 0.09
PABPC4-217ENST00000492519 CHIC1Q5VXU3 224 aa15.21■□□□□ 0.03
PABPC4-217ENST00000492519 PHF23Q9BUL5 403 aaPredicted RBP13.43□□□□□ -0.26
PABPC4-217ENST00000492519 SENP3Q9H4L4 574 aaPredicted RBP13.15□□□□□ -0.3
PABPC4-217ENST00000492519 PLPPR3Q6T4P5 718 aa12.31□□□□□ -0.44
PABPC4-217ENST00000492519 FOXD1Q16676 465 aa12.25□□□□□ -0.45
PABPC4-217ENST00000492519 PPP6R1Q9UPN7 881 aa11.83□□□□□ -0.52
PABPC4-217ENST00000492519 ADRA2BP18089 450 aa11.79□□□□□ -0.52
PABPC4-217ENST00000492519 PIAS4Q8N2W9 510 aaPredicted RBP11.5□□□□□ -0.57
PABPC4-217ENST00000492519 MSH5O43196 834 aa11.22□□□□□ -0.61
PABPC4-217ENST00000492519 PPP4R3CPQ6ZMV5 832 aa10.88□□□□□ -0.67
PABPC4-217ENST00000492519 KCNA4P22459 653 aa10.75□□□□□ -0.69
PABPC4-217ENST00000492519 SCAF1Q9H7N4 1312 aaKnown RBP10.7□□□□□ -0.7
PABPC4-217ENST00000492519 MAPK8IP2Q13387 824 aaPredicted RBP10.7□□□□□ -0.7
PABPC4-217ENST00000492519 CNKSR2Q8WXI2 1034 aa10.55□□□□□ -0.72
PABPC4-217ENST00000492519 NCBP3Q53F19 620 aaKnown RBP10.54□□□□□ -0.72
PABPC4-217ENST00000492519 DMRT2Q9Y5R5 561 aa10.54□□□□□ -0.72
PABPC4-217ENST00000492519 NPM3O75607 178 aaKnown RBP10.46□□□□□ -0.73
PABPC4-217ENST00000492519 EHMT2Q96KQ7 1210 aa10.38□□□□□ -0.75
PABPC4-217ENST00000492519 RNF216Q9NWF9 866 aaPredicted RBP10.35□□□□□ -0.75
PABPC4-217ENST00000492519 HOXD11P31277 338 aaPredicted RBP10.34□□□□□ -0.75
PABPC4-217ENST00000492519 SLC4A1APQ9BWU0 796 aaKnown RBP10.27□□□□□ -0.77
PABPC4-217ENST00000492519 POTEDQ86YR6 584 aa10.24□□□□□ -0.77
PABPC4-217ENST00000492519 DNAJC5BQ9UF47 199 aa10.19□□□□□ -0.78
PABPC4-217ENST00000492519 CSRNP3Q8WYN3 585 aa10.11□□□□□ -0.79
PABPC4-217ENST00000492519 DCAF8L1A6NGE4 600 aa9.98□□□□□ -0.81
PABPC4-217ENST00000492519 ZBTB22O15209 634 aa9.9□□□□□ -0.82
PABPC4-217ENST00000492519 SLC4A2P04920 1241 aa9.9□□□□□ -0.82
PABPC4-217ENST00000492519 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.77□□□□□ -0.85
PABPC4-217ENST00000492519 FOXD4L1Q9NU39 408 aa9.77□□□□□ -0.85
PABPC4-217ENST00000492519 U3KPZ7 1027 aaPredicted RBP9.69□□□□□ -0.86
PABPC4-217ENST00000492519 RNF39Q9H2S5 420 aa9.67□□□□□ -0.86
PABPC4-217ENST00000492519 MYCNP04198 464 aaPredicted RBP9.62□□□□□ -0.87
PABPC4-217ENST00000492519 C1QBPQ07021 282 aaKnown RBP9.52□□□□□ -0.89
PABPC4-217ENST00000492519 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.48□□□□□ -0.89
PABPC4-217ENST00000492519 HNRNPUL2Q1KMD3 747 aaKnown RBP9.48□□□□□ -0.89
PABPC4-217ENST00000492519 SAMD1Q6SPF0 538 aaPredicted RBP9.47□□□□□ -0.89
PABPC4-217ENST00000492519 ATXN8OSP0DMR3 200 aa9.44□□□□□ -0.9
PABPC4-217ENST00000492519 ATF5Q9Y2D1 282 aaPredicted RBP9.43□□□□□ -0.9
PABPC4-217ENST00000492519 SPINK5Q9NQ38 1064 aaPredicted RBP9.41□□□□□ -0.9
PABPC4-217ENST00000492519 APLP2Q06481 763 aa9.36□□□□□ -0.91
PABPC4-217ENST00000492519 CACNB1Q02641 598 aaPredicted RBP9.34□□□□□ -0.91
PABPC4-217ENST00000492519 CAPN15O75808 1086 aa9.3□□□□□ -0.92
PABPC4-217ENST00000492519 TRHP20396 242 aaPredicted RBP9.26□□□□□ -0.93
PABPC4-217ENST00000492519 ZNF219Q9P2Y4 722 aaPredicted RBP9.26□□□□□ -0.93
PABPC4-217ENST00000492519 DSG3P32926 999 aa9.21□□□□□ -0.94
PABPC4-217ENST00000492519 ABCB7O75027 752 aa9.15□□□□□ -0.94
PABPC4-217ENST00000492519 POLA2Q14181 598 aa9.15□□□□□ -0.94
PABPC4-217ENST00000492519 FKBP8Q14318 412 aa9.11□□□□□ -0.95
PABPC4-217ENST00000492519 MKRN4PQ13434 485 aaPredicted RBP9.03□□□□□ -0.96
PABPC4-217ENST00000492519 ZBTB12Q9Y330 459 aaPredicted RBP8.96□□□□□ -0.98
PABPC4-217ENST00000492519 FBLN2P98095 1184 aa8.92□□□□□ -0.98
PABPC4-217ENST00000492519 RTN4Q9NQC3 1192 aaKnown RBP8.88□□□□□ -0.99
PABPC4-217ENST00000492519 AMER1Q5JTC6 1135 aaPredicted RBP8.84□□□□□ -0.99
PABPC4-217ENST00000492519 OSCARQ8IYS5 282 aa8.84□□□□□ -0.99
PABPC4-217ENST00000492519 SPDYE4A6NLX3 237 aa8.77□□□□□ -1.01
PABPC4-217ENST00000492519 SPDYE2BA6NHP3 402 aa8.76□□□□□ -1.01
PABPC4-217ENST00000492519 SPDYE6P0CI01 402 aa8.76□□□□□ -1.01
PABPC4-217ENST00000492519 SPDYE2Q495Y8 402 aa8.76□□□□□ -1.01
PABPC4-217ENST00000492519 SSUH2Q9Y2M2 353 aa8.72□□□□□ -1.01
PABPC4-217ENST00000492519 PROM2Q8N271 834 aa8.7□□□□□ -1.02
PABPC4-217ENST00000492519 RBM42Q9BTD8 480 aaKnown RBP8.7□□□□□ -1.02
PABPC4-217ENST00000492519 ZNF692Q9BU19 519 aaPredicted RBP8.7□□□□□ -1.02
PABPC4-217ENST00000492519 FBXO3Q9UK99 471 aa8.65□□□□□ -1.02
PABPC4-217ENST00000492519 AKT1S1Q96B36 256 aa8.64□□□□□ -1.03
PABPC4-217ENST00000492519 PABPN1Q86U42 306 aaKnown RBP eCLIP8.61□□□□□ -1.03
PABPC4-217ENST00000492519 REM2Q8IYK8 340 aaPredicted RBP8.57□□□□□ -1.04
PABPC4-217ENST00000492519 VASPP50552 380 aaPredicted RBP8.55□□□□□ -1.04
PABPC4-217ENST00000492519 SLC24A1O60721 1099 aa8.53□□□□□ -1.04
PABPC4-217ENST00000492519 PITPNM1O00562 1244 aa8.48□□□□□ -1.05
PABPC4-217ENST00000492519 IFNLR1Q8IU57 520 aaPredicted RBP8.48□□□□□ -1.05
PABPC4-217ENST00000492519 SPDYE1Q8NFV5 336 aaPredicted RBP8.47□□□□□ -1.05
PABPC4-217ENST00000492519 STAG3Q9UJ98 1225 aa8.44□□□□□ -1.06
PABPC4-217ENST00000492519 CLEC11AQ9Y240 323 aa8.41□□□□□ -1.06
PABPC4-217ENST00000492519 CHRDL2Q6WN34 429 aa8.37□□□□□ -1.07
PABPC4-217ENST00000492519 PRR29P0C7W0 189 aa8.35□□□□□ -1.07
PABPC4-217ENST00000492519 FXR2P51116 673 aaKnown RBP eCLIP8.33□□□□□ -1.08
PABPC4-217ENST00000492519 PKD2Q13563 968 aa8.33□□□□□ -1.08
PABPC4-217ENST00000492519 KLHL34Q8N239 644 aa8.33□□□□□ -1.08
PABPC4-217ENST00000492519 CREBZFQ9NS37 354 aa8.31□□□□□ -1.08
PABPC4-217ENST00000492519 PLCD3Q8N3E9 789 aa8.3□□□□□ -1.08
PABPC4-217ENST00000492519 SPOCK2Q92563 424 aa8.3□□□□□ -1.08
PABPC4-217ENST00000492519 PIP4P2Q8N4L2 257 aa8.29□□□□□ -1.08
PABPC4-217ENST00000492519 MIER1Q8N108 512 aa8.28□□□□□ -1.08
PABPC4-217ENST00000492519 DCAF8L2P0C7V8 631 aa8.26□□□□□ -1.09
PABPC4-217ENST00000492519 MNX1P50219 401 aaPredicted RBP8.26□□□□□ -1.09
PABPC4-217ENST00000492519 CHADLQ6NUI6 762 aa8.26□□□□□ -1.09
PABPC4-217ENST00000492519 PRKAR2AP13861 404 aaKnown RBP8.24□□□□□ -1.09
PABPC4-217ENST00000492519 ECM2O94769 699 aaPredicted RBP8.2□□□□□ -1.1
PABPC4-217ENST00000492519 PLCB2Q00722 1185 aa8.19□□□□□ -1.1
PABPC4-217ENST00000492519 FARP1Q9Y4F1 1045 aaPredicted RBP8.18□□□□□ -1.1
PABPC4-217ENST00000492519 PLEKHG5O94827 1062 aa8.17□□□□□ -1.1
PABPC4-217ENST00000492519 ZBTB47Q9UFB7 747 aaPredicted RBP8.15□□□□□ -1.1
PABPC4-217ENST00000492519 NUBP1P53384 320 aa8.14□□□□□ -1.11
PABPC4-217ENST00000492519 RGL2O15211 777 aa8.13□□□□□ -1.11
PABPC4-217ENST00000492519 CIZ1Q9ULV3 898 aaPredicted RBP8.13□□□□□ -1.11
PABPC4-217ENST00000492519 NPM1P06748 294 aaKnown RBP eCLIP8.1□□□□□ -1.11
PABPC4-217ENST00000492519 HAP1P54257 671 aaPredicted RBP8.09□□□□□ -1.11
PABPC4-217ENST00000492519 POTEHQ6S545 545 aa8.09□□□□□ -1.11
PABPC4-217ENST00000492519 RASEFQ8IZ41 740 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms