RNA–Protein interactions for RNA: ENST00000470443.5

PABPC4-210, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 1,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-210ENST00000470443 AEBP2Q6ZN18 517 aaPredicted RBP24.21■■□□□ 1.47
PABPC4-210ENST00000470443 CHIC1Q5VXU3 224 aa23.06■■□□□ 1.28
PABPC4-210ENST00000470443 SENP3Q9H4L4 574 aaPredicted RBP20.69■□□□□ 0.9
PABPC4-210ENST00000470443 PHF23Q9BUL5 403 aaPredicted RBP20.39■□□□□ 0.85
PABPC4-210ENST00000470443 FOXD1Q16676 465 aa19.24■□□□□ 0.67
PABPC4-210ENST00000470443 PLPPR3Q6T4P5 718 aa18.46■□□□□ 0.55
PABPC4-210ENST00000470443 MSH5O43196 834 aa18.03■□□□□ 0.48
PABPC4-210ENST00000470443 PPP6R1Q9UPN7 881 aa18■□□□□ 0.47
PABPC4-210ENST00000470443 PIAS4Q8N2W9 510 aaPredicted RBP17.99■□□□□ 0.47
PABPC4-210ENST00000470443 ADRA2BP18089 450 aa17.94■□□□□ 0.46
PABPC4-210ENST00000470443 POTEDQ86YR6 584 aa17.48■□□□□ 0.39
PABPC4-210ENST00000470443 SCAF1Q9H7N4 1312 aaKnown RBP16.47■□□□□ 0.23
PABPC4-210ENST00000470443 MAPK8IP2Q13387 824 aaPredicted RBP16.44■□□□□ 0.22
PABPC4-210ENST00000470443 DMRT2Q9Y5R5 561 aa16.41■□□□□ 0.22
PABPC4-210ENST00000470443 PPP4R3CPQ6ZMV5 832 aa16.15■□□□□ 0.18
PABPC4-210ENST00000470443 CNKSR2Q8WXI2 1034 aa15.87■□□□□ 0.13
PABPC4-210ENST00000470443 HOXD11P31277 338 aaPredicted RBP15.83■□□□□ 0.12
PABPC4-210ENST00000470443 NISCHQ9Y2I1 1504 aa15.78■□□□□ 0.12
PABPC4-210ENST00000470443 RNF216Q9NWF9 866 aaPredicted RBP15.72■□□□□ 0.11
PABPC4-210ENST00000470443 DCAF8L1A6NGE4 600 aa15.66■□□□□ 0.1
PABPC4-210ENST00000470443 NCBP3Q53F19 620 aaKnown RBP15.57■□□□□ 0.08
PABPC4-210ENST00000470443 CACNB1Q02641 598 aaPredicted RBP15.39■□□□□ 0.05
PABPC4-210ENST00000470443 RNF39Q9H2S5 420 aa15.38■□□□□ 0.05
PABPC4-210ENST00000470443 DNAJC5BQ9UF47 199 aa15.34■□□□□ 0.05
PABPC4-210ENST00000470443 NPM3O75607 178 aaKnown RBP15.32■□□□□ 0.04
PABPC4-210ENST00000470443 C1QBPQ07021 282 aaKnown RBP15.17■□□□□ 0.02
PABPC4-210ENST00000470443 KCNA4P22459 653 aa15.05■□□□□ -0
PABPC4-210ENST00000470443 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.04■□□□□ -08e-9■■■□□ 14.9
PABPC4-210ENST00000470443 U3KPZ7 1027 aaPredicted RBP14.74□□□□□ -0.05
PABPC4-210ENST00000470443 SLC4A2P04920 1241 aa14.62□□□□□ -0.07
PABPC4-210ENST00000470443 ABCC9O60706 1549 aa14.57□□□□□ -0.08
PABPC4-210ENST00000470443 SPINK5Q9NQ38 1064 aaPredicted RBP14.49□□□□□ -0.09
PABPC4-210ENST00000470443 CAPN15O75808 1086 aa14.46□□□□□ -0.09
PABPC4-210ENST00000470443 DSG3P32926 999 aa14.4□□□□□ -0.1
PABPC4-210ENST00000470443 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.39□□□□□ -0.11
PABPC4-210ENST00000470443 APLP2Q06481 763 aa14.39□□□□□ -0.11
PABPC4-210ENST00000470443 HNRNPUL2Q1KMD3 747 aaKnown RBP14.39□□□□□ -0.11
PABPC4-210ENST00000470443 SAMD1Q6SPF0 538 aaPredicted RBP14.3□□□□□ -0.12
PABPC4-210ENST00000470443 ZNF219Q9P2Y4 722 aaPredicted RBP14.27□□□□□ -0.13
PABPC4-210ENST00000470443 TRHP20396 242 aaPredicted RBP14.23□□□□□ -0.13
PABPC4-210ENST00000470443 SLC4A1APQ9BWU0 796 aaKnown RBP14.23□□□□□ -0.13
PABPC4-210ENST00000470443 MYCNP04198 464 aaPredicted RBP14.2□□□□□ -0.14
PABPC4-210ENST00000470443 CCDC180Q9P1Z9 1646 aa14.19□□□□□ -0.14
PABPC4-210ENST00000470443 ABCB7O75027 752 aa14.11□□□□□ -0.15
PABPC4-210ENST00000470443 FOXD4L1Q9NU39 408 aa14.07□□□□□ -0.16
PABPC4-210ENST00000470443 POLA2Q14181 598 aa13.88□□□□□ -0.19
PABPC4-210ENST00000470443 ZBTB22O15209 634 aa13.84□□□□□ -0.19
PABPC4-210ENST00000470443 ATF5Q9Y2D1 282 aaPredicted RBP13.81□□□□□ -0.2
PABPC4-210ENST00000470443 RBM42Q9BTD8 480 aaKnown RBP13.78□□□□□ -0.2
PABPC4-210ENST00000470443 POTEHQ6S545 545 aa13.71□□□□□ -0.21
PABPC4-210ENST00000470443 ATXN8OSP0DMR3 200 aa13.67□□□□□ -0.22
PABPC4-210ENST00000470443 ZBTB12Q9Y330 459 aaPredicted RBP13.67□□□□□ -0.22
PABPC4-210ENST00000470443 RB1CC1Q8TDY2 1594 aa13.64□□□□□ -0.23
PABPC4-210ENST00000470443 PABPN1Q86U42 306 aaKnown RBP eCLIP13.58□□□□□ -0.24
PABPC4-210ENST00000470443 NACADO15069 1562 aa13.49□□□□□ -0.25
PABPC4-210ENST00000470443 DCAF8L2P0C7V8 631 aa13.48□□□□□ -0.25
PABPC4-210ENST00000470443 AKT1S1Q96B36 256 aa13.45□□□□□ -0.26
PABPC4-210ENST00000470443 OSCARQ8IYS5 282 aa13.44□□□□□ -0.26
PABPC4-210ENST00000470443 UNC13AQ9UPW8 1703 aa13.42□□□□□ -0.26
PABPC4-210ENST00000470443 CHRDL2Q6WN34 429 aa13.42□□□□□ -0.26
PABPC4-210ENST00000470443 BICRAQ9NZM4 1560 aa13.37□□□□□ -0.27
PABPC4-210ENST00000470443 FBLN2P98095 1184 aa13.32□□□□□ -0.28
PABPC4-210ENST00000470443 REM2Q8IYK8 340 aaPredicted RBP13.31□□□□□ -0.28
PABPC4-210ENST00000470443 CSRNP3Q8WYN3 585 aa13.25□□□□□ -0.29
PABPC4-210ENST00000470443 SPDYE2BA6NHP3 402 aa13.23□□□□□ -0.29
PABPC4-210ENST00000470443 SPDYE6P0CI01 402 aa13.23□□□□□ -0.29
PABPC4-210ENST00000470443 SPDYE2Q495Y8 402 aa13.23□□□□□ -0.29
PABPC4-210ENST00000470443 MKRN4PQ13434 485 aaPredicted RBP13.2□□□□□ -0.3
PABPC4-210ENST00000470443 MYO15BQ96JP2 1530 aa13.19□□□□□ -0.3
PABPC4-210ENST00000470443 PITPNM1O00562 1244 aa13.16□□□□□ -0.3
PABPC4-210ENST00000470443 CC2D2AQ9P2K1 1620 aa13.12□□□□□ -0.31
PABPC4-210ENST00000470443 CECR2Q9BXF3 1484 aa13.1□□□□□ -0.31
PABPC4-210ENST00000470443 PIP4P2Q8N4L2 257 aa13.1□□□□□ -0.31
PABPC4-210ENST00000470443 FXR2P51116 673 aaKnown RBP eCLIP13.06□□□□□ -0.323e-6■■■□□ 15.6
PABPC4-210ENST00000470443 SSUH2Q9Y2M2 353 aa13.06□□□□□ -0.32
PABPC4-210ENST00000470443 EHMT2Q96KQ7 1210 aa13.05□□□□□ -0.32
PABPC4-210ENST00000470443 ZNF692Q9BU19 519 aaPredicted RBP13.04□□□□□ -0.32
PABPC4-210ENST00000470443 ZCCHC6Q5VYS8 1495 aaKnown RBP13.01□□□□□ -0.33
PABPC4-210ENST00000470443 EIF4G1Q04637 1599 aaKnown RBP13.01□□□□□ -0.33
PABPC4-210ENST00000470443 SCRIBQ14160 1630 aa13□□□□□ -0.33
PABPC4-210ENST00000470443 SPDYE1Q8NFV5 336 aaPredicted RBP12.98□□□□□ -0.33
PABPC4-210ENST00000470443 SHROOM4Q9ULL8 1493 aa12.97□□□□□ -0.33
PABPC4-210ENST00000470443 DCAF1Q9Y4B6 1507 aa12.95□□□□□ -0.34
PABPC4-210ENST00000470443 DNAJC5Q9H3Z4 198 aa12.95□□□□□ -0.34
PABPC4-210ENST00000470443 SP7Q8TDD2 431 aaPredicted RBP12.89□□□□□ -0.35
PABPC4-210ENST00000470443 CLEC11AQ9Y240 323 aa12.89□□□□□ -0.35
PABPC4-210ENST00000470443 HAX1O00165 279 aa12.84□□□□□ -0.35
PABPC4-210ENST00000470443 PRKAR2AP13861 404 aaKnown RBP12.81□□□□□ -0.36
PABPC4-210ENST00000470443 PRR29P0C7W0 189 aa12.72□□□□□ -0.37
PABPC4-210ENST00000470443 EVX2Q03828 476 aa12.67□□□□□ -0.38
PABPC4-210ENST00000470443 CHADLQ6NUI6 762 aa12.64□□□□□ -0.39
PABPC4-210ENST00000470443 C19orf67A6NJJ6 358 aa12.63□□□□□ -0.39
PABPC4-210ENST00000470443 SPDYE4A6NLX3 237 aa12.61□□□□□ -0.39
PABPC4-210ENST00000470443 CUX2O14529 1486 aa12.56□□□□□ -0.4
PABPC4-210ENST00000470443 STAG3Q9UJ98 1225 aa12.55□□□□□ -0.4
PABPC4-210ENST00000470443 ERCC6Q03468 1493 aa12.51□□□□□ -0.41
PABPC4-210ENST00000470443 FARP1Q9Y4F1 1045 aaPredicted RBP12.5□□□□□ -0.41
PABPC4-210ENST00000470443 NCAPD3P42695 1498 aa12.5□□□□□ -0.41
PABPC4-210ENST00000470443 NESP48681 1621 aa12.48□□□□□ -0.41
PABPC4-210ENST00000470443 ATAD2BQ9ULI0 1458 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms