Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.88□□□□□ -2.276e-6■■■□□ 15.9
MATR3P43243 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.4■□□□□ 0.226e-7■■■□□ 15.9
MATR3P43243 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.26e-7■■■□□ 15.9
MATR3P43243 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC8.83□□□□□ -16e-7■■■□□ 15.9
MATR3P43243 PLD1-205ENST00000440204 646 ntTSL 414.52□□□□□ -0.094e-7■■■□□ 15.9
MATR3P43243 PLD1-216ENST00000498278 996 ntTSL 56.31□□□□□ -1.44e-7■■■□□ 15.9
MATR3P43243 LINC01146-201ENST00000553496 425 ntTSL 38.61□□□□□ -1.032e-6■■■□□ 15.9
MATR3P43243 TSGA10-217ENST00000494483 559 ntTSL 223.8■■□□□ 1.47e-8■■■□□ 15.9
MATR3P43243 SETD3-203ENST00000357563 2191 ntTSL 522.73■■□□□ 1.237e-8■■■□□ 15.9
MATR3P43243 TSGA10-206ENST00000462782 561 ntTSL 221.73■■□□□ 1.077e-8■■■□□ 15.9
MATR3P43243 TSGA10-216ENST00000489926 588 ntTSL 421.07■□□□□ 0.967e-8■■■□□ 15.9
MATR3P43243 SETD3-206ENST00000453764 973 ntTSL 521.06■□□□□ 0.967e-8■■■□□ 15.9
MATR3P43243 TSGA10-218ENST00000497915 580 ntTSL 420.94■□□□□ 0.947e-8■■■□□ 15.9
MATR3P43243 STARD13-209ENST00000567873 2037 ntTSL 1 (best)20.34■□□□□ 0.852e-11■■■□□ 15.9
MATR3P43243 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.757e-8■■■□□ 15.9
MATR3P43243 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.69■□□□□ 0.747e-8■■■□□ 15.9
MATR3P43243 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.19■□□□□ 0.667e-8■■■□□ 15.9
MATR3P43243 SLC44A3-AS1-201ENST00000414374 438 ntTSL 319.05■□□□□ 0.647e-8■■■□□ 15.9
MATR3P43243 SLC44A3-AS1-216ENST00000634937 2100 ntTSL 517.26■□□□□ 0.357e-8■■■□□ 15.9
MATR3P43243 TSGA10-209ENST00000471174 595 ntTSL 416.93■□□□□ 0.37e-8■■■□□ 15.9
MATR3P43243 SLC44A3-AS1-203ENST00000421997 709 ntTSL 316.81■□□□□ 0.287e-8■■■□□ 15.9
MATR3P43243 SLC44A3-AS1-209ENST00000442418 748 ntTSL 516.63■□□□□ 0.257e-8■■■□□ 15.9
MATR3P43243 SLC44A3-AS1-202ENST00000418366 893 ntTSL 516.16■□□□□ 0.187e-8■■■□□ 15.9
MATR3P43243 SLC44A3-AS1-219ENST00000635440 3323 ntTSL 516.11■□□□□ 0.177e-8■■■□□ 15.9
MATR3P43243 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.094e-6■■■□□ 15.9
MATR3P43243 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC15.3■□□□□ 0.047e-8■■■□□ 15.9
MATR3P43243 TSGA10-210ENST00000476849 736 ntTSL 515.29■□□□□ 0.047e-8■■■□□ 15.9
MATR3P43243 SLC44A3-AS1-214ENST00000634861 1569 ntTSL 515.07■□□□□ 07e-8■■■□□ 15.9
MATR3P43243 ARSG-201ENST00000448504 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.058e-7■■■□□ 15.9
MATR3P43243 SLC44A3-AS1-210ENST00000452922 1331 ntTSL 1 (best)14.67□□□□□ -0.067e-8■■■□□ 15.9
MATR3P43243 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.18e-7■■■□□ 15.9
MATR3P43243 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.112e-11■■■□□ 15.9
MATR3P43243 TSGA10-201ENST00000355053 3037 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.127e-8■■■□□ 15.9
MATR3P43243 SLC44A3-AS1-217ENST00000635184 2404 ntTSL 513.88□□□□□ -0.197e-8■■■□□ 15.9
MATR3P43243 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC13.62□□□□□ -0.237e-8■■■□□ 15.9
MATR3P43243 SLC44A3-AS1-213ENST00000634339 2415 ntTSL 513.59□□□□□ -0.237e-8■■■□□ 15.9
MATR3P43243 ARSG-202ENST00000452479 1733 ntTSL 5 BASIC13.33□□□□□ -0.288e-7■■■□□ 15.9
MATR3P43243 SETD3-205ENST00000446066 1754 ntTSL 513.27□□□□□ -0.297e-8■■■□□ 15.9
MATR3P43243 MBTD1-202ENST00000405860 3224 ntTSL 513.16□□□□□ -0.34e-6■■■□□ 15.9
MATR3P43243 SLC44A3-AS1-218ENST00000635408 2982 ntTSL 511.52□□□□□ -0.567e-8■■■□□ 15.9
MATR3P43243 RBPJ-208ENST00000504907 1682 ntTSL 5 BASIC11.27□□□□□ -0.67e-8■■■□□ 15.9
MATR3P43243 PSMA5-204ENST00000490870 1667 ntTSL 1 (best)11.2□□□□□ -0.627e-8■■■□□ 15.9
MATR3P43243 STARD13-206ENST00000487412 939 ntTSL 1 (best)11.15□□□□□ -0.622e-11■■■□□ 15.9
MATR3P43243 DNHD1-203ENST00000472080 2288 ntTSL 211.08□□□□□ -0.647e-8■■■□□ 15.9
MATR3P43243 TSGA10-203ENST00000393483 3878 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.667e-8■■■□□ 15.9
MATR3P43243 NEDD4L-203ENST00000357895 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.72e-6■■■□□ 15.9
MATR3P43243 TSGA10-202ENST00000393482 2460 ntAPPRIS ALT2 TSL 510.59□□□□□ -0.717e-8■■■□□ 15.9
MATR3P43243 MSI2-208ENST00000579466 186 ntTSL 310.52□□□□□ -0.737e-8■■■□□ 15.9
MATR3P43243 TNFRSF10D-201ENST00000312584 3538 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.744e-6■■■□□ 15.9
MATR3P43243 STARD13-208ENST00000498019 568 ntTSL 310.03□□□□□ -0.82e-11■■■□□ 15.9
MATR3P43243 PSMA5-206ENST00000538610 1504 ntTSL 1 (best) BASIC9.97□□□□□ -0.817e-8■■■□□ 15.9
MATR3P43243 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.822e-6■■■□□ 15.9
MATR3P43243 TSGA10-207ENST00000464459 2492 ntTSL 29.8□□□□□ -0.847e-8■■■□□ 15.9
MATR3P43243 GCLC-206ENST00000509541 3774 ntTSL 59.45□□□□□ -0.97e-8■■■□□ 15.9
MATR3P43243 AC098617.1-202ENST00000428980 1207 ntTSL 5 BASIC9.1□□□□□ -0.952e-6■■■□□ 15.9
MATR3P43243 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC9.03□□□□□ -0.962e-6■■■□□ 15.9
MATR3P43243 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.187e-8■■■□□ 15.9
MATR3P43243 RBPJ-228ENST00000514730 569 ntTSL 56.96□□□□□ -1.37e-8■■■□□ 15.9
MATR3P43243 FAM169A-207ENST00000514215 5954 ntTSL 1 (best)6.83□□□□□ -1.322e-11■■■□□ 15.9
MATR3P43243 RPS6KC1-203ENST00000468069 784 ntTSL 36.02□□□□□ -1.452e-11■■■□□ 15.9
MATR3P43243 MBTD1-206ENST00000591270 2163 ntTSL 25.82□□□□□ -1.484e-6■■■□□ 15.9
MATR3P43243 RBPJ-209ENST00000504938 731 ntTSL 35.24□□□□□ -1.577e-8■■■□□ 15.9
MATR3P43243 RBPJ-220ENST00000511451 742 ntTSL 25.06□□□□□ -1.67e-8■■■□□ 15.9
MATR3P43243 RBPJ-227ENST00000514675 578 ntTSL 54.12□□□□□ -1.757e-8■■■□□ 15.9
MATR3P43243 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.787e-8■■■□□ 15.9
MATR3P43243 RBPJ-221ENST00000511546 572 ntTSL 53.88□□□□□ -1.797e-8■■■□□ 15.9
MATR3P43243 PKN2-204ENST00000436111 632 ntTSL 33.76□□□□□ -1.817e-8■■■□□ 15.9
MATR3P43243 RBPJ-215ENST00000507574 607 ntTSL 53.75□□□□□ -1.817e-8■■■□□ 15.9
MATR3P43243 RBPJ-231ENST00000515573 698 ntTSL 52.77□□□□□ -1.977e-8■■■□□ 15.9
MATR3P43243 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.097e-7■■■□□ 15.9
MATR3P43243 SLC25A13-201ENST00000265631 3136 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.797e-7■■■□□ 15.9
MATR3P43243 ZFAND3-202ENST00000373389 531 ntTSL 512.09□□□□□ -0.472e-6■■■□□ 15.9
MATR3P43243 PLCB1-226ENST00000636784 100 ntTSL 53.87□□□□□ -1.791e-6■■■□□ 15.9
MATR3P43243 SCAF8-204ENST00000461219 677 ntTSL 522.54■■□□□ 1.22e-6■■■□□ 15.9
MATR3P43243 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.662e-6■■■□□ 15.9
MATR3P43243 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC14.55□□□□□ -0.082e-6■■■□□ 15.9
MATR3P43243 SCAF8-202ENST00000367186 4908 ntTSL 2 BASIC12.22□□□□□ -0.452e-6■■■□□ 15.9
MATR3P43243 SCAF8-205ENST00000464628 468 ntTSL 512.11□□□□□ -0.472e-6■■■□□ 15.9
MATR3P43243 TMEM39A-203ENST00000461654 588 ntTSL 416.55■□□□□ 0.242e-8■■■□□ 15.9
MATR3P43243 TMEM39A-205ENST00000468676 935 ntTSL 316.19■□□□□ 0.182e-8■■■□□ 15.9
MATR3P43243 TMEM39A-211ENST00000491685 852 ntTSL 511.95□□□□□ -0.52e-8■■■□□ 15.9
MATR3P43243 TMEM39A-207ENST00000482162 554 ntTSL 510.54□□□□□ -0.722e-8■■■□□ 15.9
MATR3P43243 TMEM39A-210ENST00000490099 868 ntTSL 310.54□□□□□ -0.722e-8■■■□□ 15.9
MATR3P43243 TMEM39A-201ENST00000319172 4369 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.732e-8■■■□□ 15.9
MATR3P43243 TMEM39A-208ENST00000486159 826 ntTSL 310.14□□□□□ -0.792e-8■■■□□ 15.9
MATR3P43243 TMEM39A-202ENST00000438581 4393 ntTSL 1 (best)9.23□□□□□ -0.932e-8■■■□□ 15.9
MATR3P43243 TMEM39A-209ENST00000486235 885 ntTSL 36.95□□□□□ -1.32e-8■■■□□ 15.9
MATR3P43243 TMEM39A-212ENST00000497993 590 ntTSL 36.05□□□□□ -1.442e-8■■■□□ 15.9
MATR3P43243 CLHC1-207ENST00000428621 2052 ntTSL 28.79□□□□□ -11e-6■■■□□ 15.9
MATR3P43243 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.251e-6■■■□□ 15.9
MATR3P43243 CLHC1-209ENST00000463300 572 ntTSL 45.43□□□□□ -1.541e-6■■■□□ 15.9
MATR3P43243 CLHC1-208ENST00000451916 616 ntTSL 35.25□□□□□ -1.571e-6■■■□□ 15.9
MATR3P43243 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.24□□□□□ -1.571e-6■■■□□ 15.9
MATR3P43243 CLHC1-212ENST00000487320 594 ntTSL 44.59□□□□□ -1.671e-6■■■□□ 15.9
MATR3P43243 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.721e-6■■■□□ 15.9
MATR3P43243 CLHC1-210ENST00000464243 509 ntTSL 43.16□□□□□ -1.91e-6■■■□□ 15.9
MATR3P43243 CLHC1-213ENST00000494539 596 ntTSL 42.92□□□□□ -1.941e-6■■■□□ 15.9
MATR3P43243 CLHC1-211ENST00000466020 153 ntTSL 51.01□□□□□ -2.251e-6■■■□□ 15.9
MATR3P43243 YARS-207ENST00000481895 1018 ntTSL 521.96■■□□□ 1.113e-9■■■□□ 15.9
MATR3P43243 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.453e-9■■■□□ 15.9
Retrieved 100 of 16,209 protein–RNA pairs in 89.3 ms