RNA–Protein interactions for RNA: ENST00000553496.1

LINC01146-201, Transcript of long intergenic non-protein coding RNA 1146, humanhuman

TSL 3

Gene LINC01146, Length 425 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01146-201ENST00000553496 AEBP2Q6ZN18 517 aaPredicted RBP31.12■■■□□ 2.57
LINC01146-201ENST00000553496 CHIC1Q5VXU3 224 aa29.57■■■□□ 2.32
LINC01146-201ENST00000553496 SENP3Q9H4L4 574 aaPredicted RBP26.45■■□□□ 1.82
LINC01146-201ENST00000553496 PHF23Q9BUL5 403 aaPredicted RBP26.15■■□□□ 1.78
LINC01146-201ENST00000553496 FOXD1Q16676 465 aa24.71■■□□□ 1.55
LINC01146-201ENST00000553496 PLPPR3Q6T4P5 718 aa23.6■■□□□ 1.37
LINC01146-201ENST00000553496 PPP6R1Q9UPN7 881 aa23.17■■□□□ 1.3
LINC01146-201ENST00000553496 ADRA2BP18089 450 aa23.06■■□□□ 1.28
LINC01146-201ENST00000553496 PIAS4Q8N2W9 510 aaPredicted RBP23.04■■□□□ 1.28
LINC01146-201ENST00000553496 MSH5O43196 834 aa23.03■■□□□ 1.28
LINC01146-201ENST00000553496 POTEDQ86YR6 584 aa22.44■■□□□ 1.18
LINC01146-201ENST00000553496 MAPK8IP2Q13387 824 aaPredicted RBP21.18■□□□□ 0.98
LINC01146-201ENST00000553496 DMRT2Q9Y5R5 561 aa21.02■□□□□ 0.96
LINC01146-201ENST00000553496 SCAF1Q9H7N4 1312 aaKnown RBP21.01■□□□□ 0.95
LINC01146-201ENST00000553496 PPP4R3CPQ6ZMV5 832 aa20.72■□□□□ 0.91
LINC01146-201ENST00000553496 CNKSR2Q8WXI2 1034 aa20.3■□□□□ 0.84
LINC01146-201ENST00000553496 HOXD11P31277 338 aaPredicted RBP20.28■□□□□ 0.84
LINC01146-201ENST00000553496 RNF216Q9NWF9 866 aaPredicted RBP20.12■□□□□ 0.81
LINC01146-201ENST00000553496 DCAF8L1A6NGE4 600 aa20.06■□□□□ 0.8
LINC01146-201ENST00000553496 NCBP3Q53F19 620 aaKnown RBP19.87■□□□□ 0.77
LINC01146-201ENST00000553496 CACNB1Q02641 598 aaPredicted RBP19.71■□□□□ 0.75
LINC01146-201ENST00000553496 RNF39Q9H2S5 420 aa19.7■□□□□ 0.74
LINC01146-201ENST00000553496 NPM3O75607 178 aaKnown RBP19.68■□□□□ 0.74
LINC01146-201ENST00000553496 DNAJC5BQ9UF47 199 aa19.56■□□□□ 0.72
LINC01146-201ENST00000553496 C1QBPQ07021 282 aaKnown RBP19.38■□□□□ 0.69
LINC01146-201ENST00000553496 KCNA4P22459 653 aa19.35■□□□□ 0.69
LINC01146-201ENST00000553496 NISCHQ9Y2I1 1504 aa19.34■□□□□ 0.69
LINC01146-201ENST00000553496 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.24■□□□□ 0.677e-8■■■■□ 19.4
LINC01146-201ENST00000553496 U3KPZ7 1027 aaPredicted RBP18.92■□□□□ 0.62
LINC01146-201ENST00000553496 SLC4A2P04920 1241 aa18.81■□□□□ 0.6
LINC01146-201ENST00000553496 SPINK5Q9NQ38 1064 aaPredicted RBP18.63■□□□□ 0.57
LINC01146-201ENST00000553496 CAPN15O75808 1086 aa18.52■□□□□ 0.56
LINC01146-201ENST00000553496 DSG3P32926 999 aa18.47■□□□□ 0.55
LINC01146-201ENST00000553496 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.31■□□□□ 0.52
LINC01146-201ENST00000553496 HNRNPUL2Q1KMD3 747 aaKnown RBP18.31■□□□□ 0.52
LINC01146-201ENST00000553496 APLP2Q06481 763 aa18.28■□□□□ 0.52
LINC01146-201ENST00000553496 TRHP20396 242 aaPredicted RBP18.25■□□□□ 0.51
LINC01146-201ENST00000553496 SAMD1Q6SPF0 538 aaPredicted RBP18.23■□□□□ 0.51
LINC01146-201ENST00000553496 SLC4A1APQ9BWU0 796 aaKnown RBP18.23■□□□□ 0.51
LINC01146-201ENST00000553496 ZNF219Q9P2Y4 722 aaPredicted RBP18.21■□□□□ 0.51
LINC01146-201ENST00000553496 MYCNP04198 464 aaPredicted RBP18.15■□□□□ 0.5
LINC01146-201ENST00000553496 ABCB7O75027 752 aa18.13■□□□□ 0.49
LINC01146-201ENST00000553496 FOXD4L1Q9NU39 408 aa18.01■□□□□ 0.47
LINC01146-201ENST00000553496 ZBTB22O15209 634 aa17.84■□□□□ 0.45
LINC01146-201ENST00000553496 ATF5Q9Y2D1 282 aaPredicted RBP17.81■□□□□ 0.44
LINC01146-201ENST00000553496 POLA2Q14181 598 aa17.8■□□□□ 0.44
LINC01146-201ENST00000553496 POTEHQ6S545 545 aa17.57■□□□□ 0.4
LINC01146-201ENST00000553496 RBM42Q9BTD8 480 aaKnown RBP17.55■□□□□ 0.4
LINC01146-201ENST00000553496 ATXN8OSP0DMR3 200 aa17.44■□□□□ 0.38
LINC01146-201ENST00000553496 ZBTB12Q9Y330 459 aaPredicted RBP17.39■□□□□ 0.37
LINC01146-201ENST00000553496 OSCARQ8IYS5 282 aa17.24■□□□□ 0.35
LINC01146-201ENST00000553496 AKT1S1Q96B36 256 aa17.19■□□□□ 0.34
LINC01146-201ENST00000553496 CHRDL2Q6WN34 429 aa17.18■□□□□ 0.34
LINC01146-201ENST00000553496 CCDC180Q9P1Z9 1646 aa17.17■□□□□ 0.34
LINC01146-201ENST00000553496 REM2Q8IYK8 340 aaPredicted RBP17.05■□□□□ 0.32
LINC01146-201ENST00000553496 CSRNP3Q8WYN3 585 aa17.04■□□□□ 0.32
LINC01146-201ENST00000553496 FBLN2P98095 1184 aa16.99■□□□□ 0.31
LINC01146-201ENST00000553496 MKRN4PQ13434 485 aaPredicted RBP16.99■□□□□ 0.31
LINC01146-201ENST00000553496 SPDYE2BA6NHP3 402 aa16.9■□□□□ 0.3
LINC01146-201ENST00000553496 SPDYE6P0CI01 402 aa16.9■□□□□ 0.3
LINC01146-201ENST00000553496 SPDYE2Q495Y8 402 aa16.9■□□□□ 0.3
LINC01146-201ENST00000553496 PITPNM1O00562 1244 aa16.88■□□□□ 0.29
LINC01146-201ENST00000553496 PIP4P2Q8N4L2 257 aa16.81■□□□□ 0.28
LINC01146-201ENST00000553496 EHMT2Q96KQ7 1210 aa16.78■□□□□ 0.28
LINC01146-201ENST00000553496 ABCC9O60706 1549 aa16.74■□□□□ 0.27
LINC01146-201ENST00000553496 FXR2P51116 673 aaKnown RBP eCLIP16.73■□□□□ 0.27
LINC01146-201ENST00000553496 SSUH2Q9Y2M2 353 aa16.73■□□□□ 0.27
LINC01146-201ENST00000553496 ZNF692Q9BU19 519 aaPredicted RBP16.69■□□□□ 0.26
LINC01146-201ENST00000553496 SPDYE1Q8NFV5 336 aaPredicted RBP16.57■□□□□ 0.24
LINC01146-201ENST00000553496 CLEC11AQ9Y240 323 aa16.52■□□□□ 0.24
LINC01146-201ENST00000553496 SP7Q8TDD2 431 aaPredicted RBP16.49■□□□□ 0.23
LINC01146-201ENST00000553496 PABPN1Q86U42 306 aaKnown RBP eCLIP16.46■□□□□ 0.23
LINC01146-201ENST00000553496 HAX1O00165 279 aa16.43■□□□□ 0.22
LINC01146-201ENST00000553496 PRKAR2AP13861 404 aaKnown RBP16.42■□□□□ 0.22
LINC01146-201ENST00000553496 EVX2Q03828 476 aa16.34■□□□□ 0.21
LINC01146-201ENST00000553496 PRR29P0C7W0 189 aa16.27■□□□□ 0.2
LINC01146-201ENST00000553496 CHADLQ6NUI6 762 aa16.26■□□□□ 0.19
LINC01146-201ENST00000553496 MYO15BQ96JP2 1530 aa16.23■□□□□ 0.19
LINC01146-201ENST00000553496 NACADO15069 1562 aa16.21■□□□□ 0.19
LINC01146-201ENST00000553496 C19orf67A6NJJ6 358 aa16.19■□□□□ 0.18
LINC01146-201ENST00000553496 RB1CC1Q8TDY2 1594 aa16.18■□□□□ 0.18
LINC01146-201ENST00000553496 SPDYE4A6NLX3 237 aa16.14■□□□□ 0.17
LINC01146-201ENST00000553496 DCAF1Q9Y4B6 1507 aa16.11■□□□□ 0.17
LINC01146-201ENST00000553496 ZCCHC6Q5VYS8 1495 aaKnown RBP16.1■□□□□ 0.17
LINC01146-201ENST00000553496 FARP1Q9Y4F1 1045 aaPredicted RBP16.02■□□□□ 0.16
LINC01146-201ENST00000553496 DCAF8L2P0C7V8 631 aa16.01■□□□□ 0.15
LINC01146-201ENST00000553496 STAG3Q9UJ98 1225 aa15.99■□□□□ 0.15
LINC01146-201ENST00000553496 CREBZFQ9NS37 354 aa15.95■□□□□ 0.14
LINC01146-201ENST00000553496 GABBR2O75899 941 aa15.92■□□□□ 0.14
LINC01146-201ENST00000553496 CD44P16070 742 aaKnown RBP15.89■□□□□ 0.13
LINC01146-201ENST00000553496 PROM2Q8N271 834 aa15.84■□□□□ 0.13
LINC01146-201ENST00000553496 MNX1P50219 401 aaPredicted RBP15.72■□□□□ 0.11
LINC01146-201ENST00000553496 SHROOM4Q9ULL8 1493 aa15.7■□□□□ 0.1
LINC01146-201ENST00000553496 ZNF579Q8NAF0 562 aaKnown RBP15.68■□□□□ 0.1
LINC01146-201ENST00000553496 ZRANB1Q9UGI0 708 aa15.67■□□□□ 0.1
LINC01146-201ENST00000553496 BICRAQ9NZM4 1560 aa15.66■□□□□ 0.1
LINC01146-201ENST00000553496 POTEIP0CG38 1075 aa15.64■□□□□ 0.09
LINC01146-201ENST00000553496 CLCN6P51797 869 aa15.63■□□□□ 0.09
LINC01146-201ENST00000553496 UNC13AQ9UPW8 1703 aa15.62■□□□□ 0.09
LINC01146-201ENST00000553496 NPM1P06748 294 aaKnown RBP eCLIP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms