Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC105339.3-201ENST00000560043 636 ntBASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 AP000867.4-201ENST00000641616 219 ntBASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC107918.4-202ENST00000641623 219 ntBASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC9.43□□□□□ -0.9
KRTAP4-1Q9BYQ7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC112698.1-201ENST00000510299 916 ntBASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC9.42□□□□□ -0.9
KRTAP4-1Q9BYQ7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 AL591424.1-201ENST00000442569 1213 ntBASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 DNAJB3-202ENST00000449667 1266 ntBASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC004967.1-201ENST00000453589 447 ntBASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 HS6ST1P1-201ENST00000481504 1234 ntBASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC9.41□□□□□ -0.9
KRTAP4-1Q9BYQ7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC9.41□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms