Protein–RNA interactions for Protein: Q8NA56

TTC29, Tetratricopeptide repeat protein 29, humanhuman

Predicted RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC29Q8NA56 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
TTC29Q8NA56 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TTC29Q8NA56 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.71■□□□□ 0.42
TTC29Q8NA56 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.71■□□□□ 0.42
TTC29Q8NA56 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TTC29Q8NA56 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TTC29Q8NA56 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TTC29Q8NA56 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TTC29Q8NA56 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.7■□□□□ 0.42
TTC29Q8NA56 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TTC29Q8NA56 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TTC29Q8NA56 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.7■□□□□ 0.42
TTC29Q8NA56 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.7■□□□□ 0.42
TTC29Q8NA56 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TTC29Q8NA56 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TTC29Q8NA56 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TTC29Q8NA56 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.7■□□□□ 0.42
TTC29Q8NA56 KRT18P38-201ENST00000449496 1282 ntBASIC17.7■□□□□ 0.42
TTC29Q8NA56 RASA4DP-201ENST00000460726 1199 ntBASIC17.7■□□□□ 0.42
TTC29Q8NA56 SEC1P-202ENST00000473944 940 ntBASIC17.7■□□□□ 0.42
TTC29Q8NA56 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.7■□□□□ 0.42
TTC29Q8NA56 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TTC29Q8NA56 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.7■□□□□ 0.42
TTC29Q8NA56 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TTC29Q8NA56 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.7■□□□□ 0.42
TTC29Q8NA56 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.7■□□□□ 0.42
TTC29Q8NA56 MYC-208ENST00000641036 567 ntBASIC17.7■□□□□ 0.42
TTC29Q8NA56 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.7■□□□□ 0.42
TTC29Q8NA56 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.7■□□□□ 0.42
TTC29Q8NA56 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
TTC29Q8NA56 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TTC29Q8NA56 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TTC29Q8NA56 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TTC29Q8NA56 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TTC29Q8NA56 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TTC29Q8NA56 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.7■□□□□ 0.42
TTC29Q8NA56 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TTC29Q8NA56 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.69■□□□□ 0.42
TTC29Q8NA56 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TTC29Q8NA56 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TTC29Q8NA56 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.69■□□□□ 0.42
TTC29Q8NA56 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TTC29Q8NA56 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TTC29Q8NA56 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC29Q8NA56 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC29Q8NA56 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC29Q8NA56 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC29Q8NA56 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC29Q8NA56 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.69■□□□□ 0.42
TTC29Q8NA56 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC29Q8NA56 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.69■□□□□ 0.42
TTC29Q8NA56 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC29Q8NA56 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TTC29Q8NA56 SPDYE15P-201ENST00000424157 909 ntBASIC17.69■□□□□ 0.42
TTC29Q8NA56 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.69■□□□□ 0.42
TTC29Q8NA56 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC29Q8NA56 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
TTC29Q8NA56 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.69■□□□□ 0.42
TTC29Q8NA56 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC29Q8NA56 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC29Q8NA56 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC29Q8NA56 AC068880.1-201ENST00000507289 2297 ntBASIC17.69■□□□□ 0.42
TTC29Q8NA56 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.69■□□□□ 0.42
TTC29Q8NA56 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC29Q8NA56 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.69■□□□□ 0.42
TTC29Q8NA56 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TTC29Q8NA56 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TTC29Q8NA56 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TTC29Q8NA56 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TTC29Q8NA56 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.68■□□□□ 0.42
TTC29Q8NA56 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC29Q8NA56 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.68■□□□□ 0.42
TTC29Q8NA56 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC29Q8NA56 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC29Q8NA56 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC29Q8NA56 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC29Q8NA56 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TTC29Q8NA56 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.68■□□□□ 0.42
TTC29Q8NA56 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.68■□□□□ 0.42
TTC29Q8NA56 AL031133.1-201ENST00000406807 723 ntBASIC17.68■□□□□ 0.42
TTC29Q8NA56 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.68■□□□□ 0.42
TTC29Q8NA56 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
TTC29Q8NA56 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.68■□□□□ 0.42
TTC29Q8NA56 AC104390.1-201ENST00000555663 520 ntBASIC17.68■□□□□ 0.42
TTC29Q8NA56 AC009065.1-201ENST00000564055 1225 ntBASIC17.68■□□□□ 0.42
TTC29Q8NA56 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.68■□□□□ 0.42
TTC29Q8NA56 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC29Q8NA56 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TTC29Q8NA56 AL121956.5-201ENST00000625261 221 ntBASIC17.68■□□□□ 0.42
TTC29Q8NA56 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC29Q8NA56 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.68■□□□□ 0.42
TTC29Q8NA56 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TTC29Q8NA56 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC29Q8NA56 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TTC29Q8NA56 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.68■□□□□ 0.42
TTC29Q8NA56 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TTC29Q8NA56 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TTC29Q8NA56 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TTC29Q8NA56 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TTC29Q8NA56 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms