Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RFX6Q8HWS3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19■□□□□ 0.63
RFX6Q8HWS3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19■□□□□ 0.63
RFX6Q8HWS3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19■□□□□ 0.63
RFX6Q8HWS3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFX6Q8HWS3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19■□□□□ 0.63
RFX6Q8HWS3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19■□□□□ 0.63
RFX6Q8HWS3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFX6Q8HWS3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RFX6Q8HWS3 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RFX6Q8HWS3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFX6Q8HWS3 AC093827.2-201ENST00000512654 315 ntBASIC19■□□□□ 0.63
RFX6Q8HWS3 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19■□□□□ 0.63
RFX6Q8HWS3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFX6Q8HWS3 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFX6Q8HWS3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19■□□□□ 0.63
RFX6Q8HWS3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RFX6Q8HWS3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RFX6Q8HWS3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFX6Q8HWS3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
RFX6Q8HWS3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFX6Q8HWS3 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFX6Q8HWS3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFX6Q8HWS3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFX6Q8HWS3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
RFX6Q8HWS3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19■□□□□ 0.63
RFX6Q8HWS3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19■□□□□ 0.63
RFX6Q8HWS3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19■□□□□ 0.63
RFX6Q8HWS3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFX6Q8HWS3 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RFX6Q8HWS3 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19■□□□□ 0.63
RFX6Q8HWS3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 AL596275.1-201ENST00000423464 877 ntBASIC18.99■□□□□ 0.63
RFX6Q8HWS3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.99■□□□□ 0.63
RFX6Q8HWS3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 ECEL1P2-202ENST00000465689 757 ntBASIC18.99■□□□□ 0.63
RFX6Q8HWS3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 AC104390.1-201ENST00000555663 520 ntBASIC18.99■□□□□ 0.63
RFX6Q8HWS3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX6Q8HWS3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 AC009065.1-201ENST00000564055 1225 ntBASIC18.98■□□□□ 0.63
RFX6Q8HWS3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX6Q8HWS3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RFX6Q8HWS3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms