Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
WNT3AP56704 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
WNT3AP56704 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.45■□□□□ 0.54
WNT3AP56704 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
WNT3AP56704 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
WNT3AP56704 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
WNT3AP56704 RCN1P1-201ENST00000400413 996 ntBASIC18.45■□□□□ 0.54
WNT3AP56704 SPDYE15P-201ENST00000424157 909 ntBASIC18.45■□□□□ 0.54
WNT3AP56704 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.45■□□□□ 0.54
WNT3AP56704 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
WNT3AP56704 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.45■□□□□ 0.54
WNT3AP56704 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.45■□□□□ 0.54
WNT3AP56704 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.45■□□□□ 0.54
WNT3AP56704 AC018470.1-201ENST00000624790 3129 ntBASIC18.45■□□□□ 0.54
WNT3AP56704 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.45■□□□□ 0.54
WNT3AP56704 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
WNT3AP56704 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
WNT3AP56704 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
WNT3AP56704 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
WNT3AP56704 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
WNT3AP56704 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
WNT3AP56704 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.45■□□□□ 0.54
WNT3AP56704 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
WNT3AP56704 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
WNT3AP56704 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.44■□□□□ 0.54
WNT3AP56704 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
WNT3AP56704 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
WNT3AP56704 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.44■□□□□ 0.54
WNT3AP56704 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
WNT3AP56704 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
WNT3AP56704 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
WNT3AP56704 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
WNT3AP56704 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
WNT3AP56704 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
WNT3AP56704 RNF152P1-201ENST00000397754 604 ntBASIC18.44■□□□□ 0.54
WNT3AP56704 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
WNT3AP56704 TSPY5P-201ENST00000426936 936 ntBASIC18.44■□□□□ 0.54
WNT3AP56704 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.44■□□□□ 0.54
WNT3AP56704 AC104076.2-201ENST00000448912 469 ntBASIC18.44■□□□□ 0.54
WNT3AP56704 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.44■□□□□ 0.54
WNT3AP56704 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.44■□□□□ 0.54
WNT3AP56704 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
WNT3AP56704 AC079602.3-201ENST00000623931 403 ntBASIC18.44■□□□□ 0.54
WNT3AP56704 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
WNT3AP56704 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
WNT3AP56704 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
WNT3AP56704 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
WNT3AP56704 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
WNT3AP56704 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.44■□□□□ 0.54
WNT3AP56704 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.43■□□□□ 0.54
WNT3AP56704 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.43■□□□□ 0.54
WNT3AP56704 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
WNT3AP56704 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
WNT3AP56704 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
WNT3AP56704 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
WNT3AP56704 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
WNT3AP56704 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.43■□□□□ 0.54
WNT3AP56704 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.43■□□□□ 0.54
WNT3AP56704 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
WNT3AP56704 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
WNT3AP56704 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
WNT3AP56704 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
WNT3AP56704 STARP1-201ENST00000397973 869 ntBASIC18.43■□□□□ 0.54
WNT3AP56704 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
WNT3AP56704 AK4P3-201ENST00000418260 669 ntBASIC18.43■□□□□ 0.54
WNT3AP56704 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.43■□□□□ 0.54
WNT3AP56704 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.43■□□□□ 0.54
WNT3AP56704 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
WNT3AP56704 RN7SL850P-201ENST00000579959 291 ntBASIC18.43■□□□□ 0.54
WNT3AP56704 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
WNT3AP56704 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
WNT3AP56704 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
WNT3AP56704 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.43■□□□□ 0.54
WNT3AP56704 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.43■□□□□ 0.54
WNT3AP56704 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
WNT3AP56704 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
WNT3AP56704 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
WNT3AP56704 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
WNT3AP56704 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
WNT3AP56704 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
WNT3AP56704 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
WNT3AP56704 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
WNT3AP56704 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
WNT3AP56704 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
WNT3AP56704 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
WNT3AP56704 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.42■□□□□ 0.54
WNT3AP56704 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
WNT3AP56704 AC093010.1-201ENST00000473625 1624 ntBASIC18.42■□□□□ 0.54
WNT3AP56704 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
WNT3AP56704 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
WNT3AP56704 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
WNT3AP56704 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.42■□□□□ 0.54
WNT3AP56704 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
WNT3AP56704 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
WNT3AP56704 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
WNT3AP56704 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.42■□□□□ 0.54
WNT3AP56704 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.42■□□□□ 0.54
WNT3AP56704 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
WNT3AP56704 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.42■□□□□ 0.54
WNT3AP56704 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms