Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 AP002414.2-201ENST00000591780 3365 ntBASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 LINC02199-201ENST00000506655 2702 ntBASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 AC073957.3-201ENST00000609998 6758 ntBASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 AL122018.1-201ENST00000446607 2310 ntBASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
SPTSSBQ8NFR3 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 FXN-202ENST00000396364 980 ntTSL 5 BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 CLTA-210ENST00000540080 989 ntTSL 2 BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 AL451085.2-201ENST00000605085 799 ntBASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
SPTSSBQ8NFR3 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms