Protein–RNA interactions for Protein: O95777

LSM8, U6 snRNA-associated Sm-like protein LSm8, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8O95777 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LSM8O95777 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
LSM8O95777 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LSM8O95777 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM8O95777 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.29■□□□□ 0.68
LSM8O95777 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LSM8O95777 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LSM8O95777 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LSM8O95777 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM8O95777 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LSM8O95777 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM8O95777 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM8O95777 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.28■□□□□ 0.68
LSM8O95777 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LSM8O95777 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM8O95777 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM8O95777 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.28■□□□□ 0.68
LSM8O95777 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
LSM8O95777 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
LSM8O95777 STARP1-201ENST00000397973 869 ntBASIC19.28■□□□□ 0.68
LSM8O95777 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LSM8O95777 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.28■□□□□ 0.68
LSM8O95777 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM8O95777 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.28■□□□□ 0.68
LSM8O95777 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.28■□□□□ 0.68
LSM8O95777 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.28■□□□□ 0.68
LSM8O95777 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
LSM8O95777 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.28■□□□□ 0.68
LSM8O95777 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.28■□□□□ 0.68
LSM8O95777 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LSM8O95777 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM8O95777 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LSM8O95777 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LSM8O95777 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LSM8O95777 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.27■□□□□ 0.68
LSM8O95777 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM8O95777 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LSM8O95777 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
LSM8O95777 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM8O95777 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LSM8O95777 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM8O95777 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM8O95777 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LSM8O95777 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM8O95777 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.27■□□□□ 0.68
LSM8O95777 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
LSM8O95777 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM8O95777 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LSM8O95777 AC117947.1-201ENST00000427448 529 ntBASIC19.27■□□□□ 0.68
LSM8O95777 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.27■□□□□ 0.68
LSM8O95777 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.27■□□□□ 0.68
LSM8O95777 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM8O95777 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.27■□□□□ 0.68
LSM8O95777 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM8O95777 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.27■□□□□ 0.68
LSM8O95777 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM8O95777 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LSM8O95777 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM8O95777 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LSM8O95777 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
LSM8O95777 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.27■□□□□ 0.67
LSM8O95777 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LSM8O95777 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
LSM8O95777 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.27■□□□□ 0.67
LSM8O95777 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LSM8O95777 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LSM8O95777 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.27■□□□□ 0.67
LSM8O95777 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LSM8O95777 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LSM8O95777 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LSM8O95777 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSM8O95777 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSM8O95777 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSM8O95777 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LSM8O95777 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LSM8O95777 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSM8O95777 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.26■□□□□ 0.67
LSM8O95777 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSM8O95777 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LSM8O95777 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LSM8O95777 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.26■□□□□ 0.67
LSM8O95777 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LSM8O95777 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSM8O95777 KRT18P57-201ENST00000443599 1254 ntBASIC19.26■□□□□ 0.67
LSM8O95777 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.26■□□□□ 0.67
LSM8O95777 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.26■□□□□ 0.67
LSM8O95777 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.26■□□□□ 0.67
LSM8O95777 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.26■□□□□ 0.67
LSM8O95777 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LSM8O95777 AC008764.6-201ENST00000595909 2069 ntBASIC19.26■□□□□ 0.67
LSM8O95777 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.26■□□□□ 0.67
LSM8O95777 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.26■□□□□ 0.67
LSM8O95777 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
LSM8O95777 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LSM8O95777 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSM8O95777 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LSM8O95777 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LSM8O95777 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.25■□□□□ 0.67
LSM8O95777 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LSM8O95777 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms