Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.28■□□□□ 0.36
URB1O60287 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
URB1O60287 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
URB1O60287 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
URB1O60287 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.28■□□□□ 0.36
URB1O60287 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
URB1O60287 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
URB1O60287 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
URB1O60287 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
URB1O60287 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
URB1O60287 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
URB1O60287 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
URB1O60287 METTL21AP1-201ENST00000438852 635 ntBASIC17.28■□□□□ 0.36
URB1O60287 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.28■□□□□ 0.36
URB1O60287 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.28■□□□□ 0.36
URB1O60287 CYMP-203ENST00000474680 1263 ntBASIC17.28■□□□□ 0.36
URB1O60287 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.28■□□□□ 0.36
URB1O60287 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.28■□□□□ 0.36
URB1O60287 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.28■□□□□ 0.36
URB1O60287 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
URB1O60287 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
URB1O60287 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.28■□□□□ 0.36
URB1O60287 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
URB1O60287 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
URB1O60287 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
URB1O60287 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
URB1O60287 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.27■□□□□ 0.36
URB1O60287 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
URB1O60287 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
URB1O60287 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
URB1O60287 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.27■□□□□ 0.36
URB1O60287 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
URB1O60287 AC092364.2-202ENST00000597012 1073 ntBASIC17.27■□□□□ 0.36
URB1O60287 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
URB1O60287 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
URB1O60287 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
URB1O60287 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
URB1O60287 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
URB1O60287 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
URB1O60287 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
URB1O60287 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
URB1O60287 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
URB1O60287 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.27■□□□□ 0.36
URB1O60287 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.27■□□□□ 0.36
URB1O60287 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
URB1O60287 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.27■□□□□ 0.36
URB1O60287 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.27■□□□□ 0.36
URB1O60287 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
URB1O60287 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
URB1O60287 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
URB1O60287 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
URB1O60287 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
URB1O60287 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
URB1O60287 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.35
URB1O60287 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
URB1O60287 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
URB1O60287 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
URB1O60287 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
URB1O60287 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
URB1O60287 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
URB1O60287 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
URB1O60287 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
URB1O60287 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
URB1O60287 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
URB1O60287 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
URB1O60287 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
URB1O60287 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
URB1O60287 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
URB1O60287 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.26■□□□□ 0.35
URB1O60287 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
URB1O60287 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
URB1O60287 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
URB1O60287 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
URB1O60287 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
URB1O60287 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
URB1O60287 AC008556.1-201ENST00000610908 2040 ntBASIC17.26■□□□□ 0.35
URB1O60287 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
URB1O60287 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
URB1O60287 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
URB1O60287 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
URB1O60287 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
URB1O60287 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.26■□□□□ 0.35
URB1O60287 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
URB1O60287 AC002347.1-201ENST00000569543 541 ntBASIC17.26■□□□□ 0.35
URB1O60287 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
URB1O60287 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.26■□□□□ 0.35
URB1O60287 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
URB1O60287 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
URB1O60287 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
URB1O60287 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
URB1O60287 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
URB1O60287 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
URB1O60287 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
URB1O60287 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
URB1O60287 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.26■□□□□ 0.35
URB1O60287 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.26■□□□□ 0.35
URB1O60287 FAM8A3P-201ENST00000427218 844 ntBASIC17.26■□□□□ 0.35
URB1O60287 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.26■□□□□ 0.35
URB1O60287 AC021087.4-201ENST00000563761 564 ntBASIC17.26■□□□□ 0.35
URB1O60287 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms