Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.73■□□□□ 0.91
USP6NLQ92738 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP6NLQ92738 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP6NLQ92738 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP6NLQ92738 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP6NLQ92738 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.72■□□□□ 0.91
USP6NLQ92738 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
USP6NLQ92738 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP6NLQ92738 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.72■□□□□ 0.91
USP6NLQ92738 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP6NLQ92738 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP6NLQ92738 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP6NLQ92738 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.72■□□□□ 0.91
USP6NLQ92738 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
USP6NLQ92738 FAM220CP-201ENST00000395253 831 ntBASIC20.72■□□□□ 0.91
USP6NLQ92738 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.72■□□□□ 0.91
USP6NLQ92738 AC009533.2-201ENST00000543664 586 ntBASIC20.72■□□□□ 0.91
USP6NLQ92738 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.72■□□□□ 0.91
USP6NLQ92738 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP6NLQ92738 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.72■□□□□ 0.91
USP6NLQ92738 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP6NLQ92738 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.72■□□□□ 0.91
USP6NLQ92738 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
USP6NLQ92738 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP6NLQ92738 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
USP6NLQ92738 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP6NLQ92738 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.72■□□□□ 0.91
USP6NLQ92738 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP6NLQ92738 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP6NLQ92738 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.72■□□□□ 0.91
USP6NLQ92738 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
USP6NLQ92738 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP6NLQ92738 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP6NLQ92738 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.72■□□□□ 0.91
USP6NLQ92738 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
USP6NLQ92738 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP6NLQ92738 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP6NLQ92738 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP6NLQ92738 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
USP6NLQ92738 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.71■□□□□ 0.91
USP6NLQ92738 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP6NLQ92738 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP6NLQ92738 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP6NLQ92738 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
USP6NLQ92738 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP6NLQ92738 AC005104.2-201ENST00000427818 678 ntBASIC20.71■□□□□ 0.91
USP6NLQ92738 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.71■□□□□ 0.91
USP6NLQ92738 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP6NLQ92738 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.71■□□□□ 0.91
USP6NLQ92738 AC021087.4-201ENST00000563761 564 ntBASIC20.71■□□□□ 0.91
USP6NLQ92738 AC008687.5-201ENST00000593746 558 ntBASIC20.71■□□□□ 0.91
USP6NLQ92738 AC011467.2-201ENST00000598425 242 ntBASIC20.71■□□□□ 0.91
USP6NLQ92738 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP6NLQ92738 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP6NLQ92738 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP6NLQ92738 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP6NLQ92738 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
USP6NLQ92738 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP6NLQ92738 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.71■□□□□ 0.91
USP6NLQ92738 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP6NLQ92738 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP6NLQ92738 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
USP6NLQ92738 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.71■□□□□ 0.91
USP6NLQ92738 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP6NLQ92738 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.7■□□□□ 0.9
USP6NLQ92738 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP6NLQ92738 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
USP6NLQ92738 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP6NLQ92738 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP6NLQ92738 RPS2P28-201ENST00000314255 741 ntBASIC20.7■□□□□ 0.9
USP6NLQ92738 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.7■□□□□ 0.9
USP6NLQ92738 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.7■□□□□ 0.9
USP6NLQ92738 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP6NLQ92738 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.7■□□□□ 0.9
USP6NLQ92738 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP6NLQ92738 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP6NLQ92738 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.7■□□□□ 0.9
USP6NLQ92738 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
USP6NLQ92738 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP6NLQ92738 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP6NLQ92738 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.7■□□□□ 0.9
USP6NLQ92738 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
USP6NLQ92738 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.7■□□□□ 0.9
USP6NLQ92738 AP005117.1-201ENST00000584346 1413 ntBASIC20.7■□□□□ 0.9
USP6NLQ92738 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
USP6NLQ92738 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP6NLQ92738 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP6NLQ92738 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.69■□□□□ 0.9
USP6NLQ92738 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP6NLQ92738 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP6NLQ92738 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.69■□□□□ 0.9
USP6NLQ92738 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.69■□□□□ 0.9
USP6NLQ92738 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP6NLQ92738 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.69■□□□□ 0.9
USP6NLQ92738 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
USP6NLQ92738 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP6NLQ92738 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP6NLQ92738 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
USP6NLQ92738 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
USP6NLQ92738 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms