Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
THRAP10827 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
THRAP10827 RNF152P1-201ENST00000397754 604 ntBASIC18.43■□□□□ 0.54
THRAP10827 FAM8A6P-201ENST00000407496 1135 ntBASIC18.43■□□□□ 0.54
THRAP10827 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.43■□□□□ 0.54
THRAP10827 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.43■□□□□ 0.54
THRAP10827 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.43■□□□□ 0.54
THRAP10827 COX11P1-201ENST00000489116 835 ntBASIC18.43■□□□□ 0.54
THRAP10827 YBX1P2-201ENST00000489612 999 ntBASIC18.43■□□□□ 0.54
THRAP10827 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.43■□□□□ 0.54
THRAP10827 AL512604.3-201ENST00000569583 964 ntBASIC18.43■□□□□ 0.54
THRAP10827 AC141257.4-201ENST00000634557 245 ntBASIC18.43■□□□□ 0.54
THRAP10827 AC136944.6-201ENST00000634818 245 ntBASIC18.43■□□□□ 0.54
THRAP10827 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.43■□□□□ 0.54
THRAP10827 AC083906.6-201ENST00000641366 219 ntBASIC18.43■□□□□ 0.54
THRAP10827 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.43■□□□□ 0.54
THRAP10827 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
THRAP10827 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.43■□□□□ 0.54
THRAP10827 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
THRAP10827 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
THRAP10827 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
THRAP10827 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
THRAP10827 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
THRAP10827 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
THRAP10827 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
THRAP10827 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THRAP10827 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
THRAP10827 HTR7P1-202ENST00000624664 4411 ntBASIC18.42■□□□□ 0.54
THRAP10827 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
THRAP10827 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
THRAP10827 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.42■□□□□ 0.54
THRAP10827 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
THRAP10827 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
THRAP10827 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
THRAP10827 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THRAP10827 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.42■□□□□ 0.54
THRAP10827 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
THRAP10827 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THRAP10827 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.42■□□□□ 0.54
THRAP10827 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
THRAP10827 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
THRAP10827 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THRAP10827 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THRAP10827 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THRAP10827 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
THRAP10827 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.42■□□□□ 0.54
THRAP10827 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
THRAP10827 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.42■□□□□ 0.54
THRAP10827 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
THRAP10827 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
THRAP10827 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.42■□□□□ 0.54
THRAP10827 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
THRAP10827 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.42■□□□□ 0.54
THRAP10827 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
THRAP10827 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.42■□□□□ 0.54
THRAP10827 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
THRAP10827 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
THRAP10827 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
THRAP10827 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THRAP10827 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
THRAP10827 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.42■□□□□ 0.54
THRAP10827 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
THRAP10827 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THRAP10827 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
THRAP10827 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
THRAP10827 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THRAP10827 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THRAP10827 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
THRAP10827 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
THRAP10827 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THRAP10827 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
THRAP10827 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.41■□□□□ 0.54
THRAP10827 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.41■□□□□ 0.54
THRAP10827 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.41■□□□□ 0.54
THRAP10827 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.41■□□□□ 0.54
THRAP10827 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.41■□□□□ 0.54
THRAP10827 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.41■□□□□ 0.54
THRAP10827 PRSS44-201ENST00000515154 1146 ntBASIC18.41■□□□□ 0.54
THRAP10827 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
THRAP10827 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
THRAP10827 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.41■□□□□ 0.54
THRAP10827 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THRAP10827 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
THRAP10827 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
THRAP10827 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
THRAP10827 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THRAP10827 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
THRAP10827 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
THRAP10827 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
THRAP10827 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
THRAP10827 KRT8P11-201ENST00000409686 1436 ntBASIC18.4■□□□□ 0.54
THRAP10827 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.4■□□□□ 0.54
THRAP10827 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
THRAP10827 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THRAP10827 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THRAP10827 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
THRAP10827 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
THRAP10827 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
THRAP10827 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
THRAP10827 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms