Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.44■□□□□ 0.86
BLOC1S4Q9NUP1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
BLOC1S4Q9NUP1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
BLOC1S4Q9NUP1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BLOC1S4Q9NUP1 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
BLOC1S4Q9NUP1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
BLOC1S4Q9NUP1 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.43■□□□□ 0.86
BLOC1S4Q9NUP1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BLOC1S4Q9NUP1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.43■□□□□ 0.86
BLOC1S4Q9NUP1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BLOC1S4Q9NUP1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BLOC1S4Q9NUP1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BLOC1S4Q9NUP1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
BLOC1S4Q9NUP1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
BLOC1S4Q9NUP1 KRT18P38-201ENST00000449496 1282 ntBASIC20.43■□□□□ 0.86
BLOC1S4Q9NUP1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
BLOC1S4Q9NUP1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
BLOC1S4Q9NUP1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
BLOC1S4Q9NUP1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
BLOC1S4Q9NUP1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.43■□□□□ 0.86
BLOC1S4Q9NUP1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
BLOC1S4Q9NUP1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BLOC1S4Q9NUP1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BLOC1S4Q9NUP1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
BLOC1S4Q9NUP1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.43■□□□□ 0.86
BLOC1S4Q9NUP1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.43■□□□□ 0.86
BLOC1S4Q9NUP1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.43■□□□□ 0.86
BLOC1S4Q9NUP1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.43■□□□□ 0.86
BLOC1S4Q9NUP1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 REXO1L9P-201ENST00000604264 2108 ntBASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 STARP1-201ENST00000397973 869 ntBASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
BLOC1S4Q9NUP1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 TSPY5P-201ENST00000426936 936 ntBASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BLOC1S4Q9NUP1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
BLOC1S4Q9NUP1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BLOC1S4Q9NUP1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
BLOC1S4Q9NUP1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
BLOC1S4Q9NUP1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
BLOC1S4Q9NUP1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
BLOC1S4Q9NUP1 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BLOC1S4Q9NUP1 RNF152P1-201ENST00000397754 604 ntBASIC20.4■□□□□ 0.86
BLOC1S4Q9NUP1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
BLOC1S4Q9NUP1 AK4P3-201ENST00000418260 669 ntBASIC20.4■□□□□ 0.86
BLOC1S4Q9NUP1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.4■□□□□ 0.86
BLOC1S4Q9NUP1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.4■□□□□ 0.86
BLOC1S4Q9NUP1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
BLOC1S4Q9NUP1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
BLOC1S4Q9NUP1 AC034232.1-201ENST00000506026 1064 ntBASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms