Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.77■□□□□ 0.76
SEMA4DQ92854 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA4DQ92854 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA4DQ92854 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA4DQ92854 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA4DQ92854 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.77■□□□□ 0.76
SEMA4DQ92854 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.77■□□□□ 0.76
SEMA4DQ92854 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA4DQ92854 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.77■□□□□ 0.76
SEMA4DQ92854 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SEMA4DQ92854 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.77■□□□□ 0.76
SEMA4DQ92854 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.77■□□□□ 0.76
SEMA4DQ92854 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA4DQ92854 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA4DQ92854 PHGDH-209ENST00000641074 1780 ntBASIC19.77■□□□□ 0.76
SEMA4DQ92854 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SEMA4DQ92854 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.77■□□□□ 0.75
SEMA4DQ92854 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SEMA4DQ92854 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.75
SEMA4DQ92854 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.76■□□□□ 0.75
SEMA4DQ92854 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SEMA4DQ92854 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA4DQ92854 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA4DQ92854 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.76■□□□□ 0.75
SEMA4DQ92854 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA4DQ92854 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA4DQ92854 SPDYE15P-201ENST00000424157 909 ntBASIC19.76■□□□□ 0.75
SEMA4DQ92854 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA4DQ92854 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.76■□□□□ 0.75
SEMA4DQ92854 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.76■□□□□ 0.75
SEMA4DQ92854 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SEMA4DQ92854 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA4DQ92854 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.76■□□□□ 0.75
SEMA4DQ92854 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.76■□□□□ 0.75
SEMA4DQ92854 AC079602.3-201ENST00000623931 403 ntBASIC19.76■□□□□ 0.75
SEMA4DQ92854 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.76■□□□□ 0.75
SEMA4DQ92854 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA4DQ92854 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.76■□□□□ 0.75
SEMA4DQ92854 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA4DQ92854 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA4DQ92854 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.76■□□□□ 0.75
SEMA4DQ92854 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SEMA4DQ92854 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SEMA4DQ92854 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA4DQ92854 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SEMA4DQ92854 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA4DQ92854 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.75■□□□□ 0.75
SEMA4DQ92854 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.75■□□□□ 0.75
SEMA4DQ92854 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA4DQ92854 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SEMA4DQ92854 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA4DQ92854 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SEMA4DQ92854 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.75■□□□□ 0.75
SEMA4DQ92854 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.75■□□□□ 0.75
SEMA4DQ92854 RASA4DP-201ENST00000460726 1199 ntBASIC19.75■□□□□ 0.75
SEMA4DQ92854 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.75■□□□□ 0.75
SEMA4DQ92854 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.75■□□□□ 0.75
SEMA4DQ92854 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.75■□□□□ 0.75
SEMA4DQ92854 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.75■□□□□ 0.75
SEMA4DQ92854 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.75■□□□□ 0.75
SEMA4DQ92854 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.75■□□□□ 0.75
SEMA4DQ92854 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SEMA4DQ92854 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.75■□□□□ 0.75
SEMA4DQ92854 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA4DQ92854 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA4DQ92854 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SEMA4DQ92854 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.75■□□□□ 0.75
SEMA4DQ92854 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA4DQ92854 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SEMA4DQ92854 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA4DQ92854 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
SEMA4DQ92854 KRT18P38-201ENST00000449496 1282 ntBASIC19.74■□□□□ 0.75
SEMA4DQ92854 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.74■□□□□ 0.75
SEMA4DQ92854 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.74■□□□□ 0.75
SEMA4DQ92854 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.74■□□□□ 0.75
SEMA4DQ92854 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.74■□□□□ 0.75
SEMA4DQ92854 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA4DQ92854 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA4DQ92854 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.74■□□□□ 0.75
SEMA4DQ92854 AL031432.5-201ENST00000641059 760 ntBASIC19.74■□□□□ 0.75
SEMA4DQ92854 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA4DQ92854 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA4DQ92854 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA4DQ92854 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA4DQ92854 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA4DQ92854 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.74■□□□□ 0.75
SEMA4DQ92854 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SEMA4DQ92854 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SEMA4DQ92854 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SEMA4DQ92854 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SEMA4DQ92854 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA4DQ92854 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA4DQ92854 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA4DQ92854 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA4DQ92854 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SEMA4DQ92854 TSPY5P-201ENST00000426936 936 ntBASIC19.73■□□□□ 0.75
SEMA4DQ92854 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.73■□□□□ 0.75
SEMA4DQ92854 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.73■□□□□ 0.75
SEMA4DQ92854 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.73■□□□□ 0.75
SEMA4DQ92854 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms