Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB43Q86YS6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB43Q86YS6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB43Q86YS6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB43Q86YS6 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB43Q86YS6 HBZP1-201ENST00000354915 429 ntBASIC17.55■□□□□ 0.4
RAB43Q86YS6 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB43Q86YS6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.55■□□□□ 0.4
RAB43Q86YS6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.55■□□□□ 0.4
RAB43Q86YS6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
RAB43Q86YS6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.55■□□□□ 0.4
RAB43Q86YS6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB43Q86YS6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB43Q86YS6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB43Q86YS6 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB43Q86YS6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB43Q86YS6 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.55■□□□□ 0.4
RAB43Q86YS6 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB43Q86YS6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
RAB43Q86YS6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RAB43Q86YS6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.55■□□□□ 0.4
RAB43Q86YS6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RAB43Q86YS6 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RAB43Q86YS6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB43Q86YS6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB43Q86YS6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB43Q86YS6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB43Q86YS6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB43Q86YS6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB43Q86YS6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
RAB43Q86YS6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB43Q86YS6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
RAB43Q86YS6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RAB43Q86YS6 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.54■□□□□ 0.4
RAB43Q86YS6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB43Q86YS6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.54■□□□□ 0.4
RAB43Q86YS6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB43Q86YS6 AL645929.1-201ENST00000420084 975 ntBASIC17.54■□□□□ 0.4
RAB43Q86YS6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RAB43Q86YS6 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB43Q86YS6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.54■□□□□ 0.4
RAB43Q86YS6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.54■□□□□ 0.4
RAB43Q86YS6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB43Q86YS6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.54■□□□□ 0.4
RAB43Q86YS6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB43Q86YS6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB43Q86YS6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RAB43Q86YS6 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.54■□□□□ 0.4
RAB43Q86YS6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
RAB43Q86YS6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RAB43Q86YS6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB43Q86YS6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB43Q86YS6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RAB43Q86YS6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RAB43Q86YS6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB43Q86YS6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB43Q86YS6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.53■□□□□ 0.4
RAB43Q86YS6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB43Q86YS6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB43Q86YS6 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.53■□□□□ 0.4
RAB43Q86YS6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB43Q86YS6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.53■□□□□ 0.4
RAB43Q86YS6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB43Q86YS6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.53■□□□□ 0.4
RAB43Q86YS6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
RAB43Q86YS6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
RAB43Q86YS6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB43Q86YS6 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.53■□□□□ 0.4
RAB43Q86YS6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB43Q86YS6 KRT126P-201ENST00000549467 1181 ntBASIC17.53■□□□□ 0.4
RAB43Q86YS6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB43Q86YS6 AC112497.1-201ENST00000624824 639 ntBASIC17.53■□□□□ 0.4
RAB43Q86YS6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB43Q86YS6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RAB43Q86YS6 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB43Q86YS6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB43Q86YS6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB43Q86YS6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RAB43Q86YS6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB43Q86YS6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RAB43Q86YS6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB43Q86YS6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB43Q86YS6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB43Q86YS6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RAB43Q86YS6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.53■□□□□ 0.4
RAB43Q86YS6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB43Q86YS6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RAB43Q86YS6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB43Q86YS6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.52■□□□□ 0.4
RAB43Q86YS6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.52■□□□□ 0.4
RAB43Q86YS6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RAB43Q86YS6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB43Q86YS6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB43Q86YS6 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
RAB43Q86YS6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB43Q86YS6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB43Q86YS6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB43Q86YS6 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RAB43Q86YS6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
RAB43Q86YS6 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms