Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 AL049597.2-201ENST00000565575 961 ntBASIC20.88■□□□□ 0.93
CCNT1O60563 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.88■□□□□ 0.93
CCNT1O60563 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.88■□□□□ 0.93
CCNT1O60563 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CCNT1O60563 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCNT1O60563 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCNT1O60563 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCNT1O60563 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCNT1O60563 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCNT1O60563 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCNT1O60563 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCNT1O60563 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCNT1O60563 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.88■□□□□ 0.93
CCNT1O60563 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNT1O60563 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNT1O60563 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CCNT1O60563 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNT1O60563 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CCNT1O60563 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNT1O60563 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNT1O60563 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCNT1O60563 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNT1O60563 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNT1O60563 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCNT1O60563 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCNT1O60563 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.87■□□□□ 0.93
CCNT1O60563 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCNT1O60563 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.87■□□□□ 0.93
CCNT1O60563 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.87■□□□□ 0.93
CCNT1O60563 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.87■□□□□ 0.93
CCNT1O60563 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.87■□□□□ 0.93
CCNT1O60563 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CCNT1O60563 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCNT1O60563 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CCNT1O60563 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.87■□□□□ 0.93
CCNT1O60563 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCNT1O60563 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.87■□□□□ 0.93
CCNT1O60563 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.87■□□□□ 0.93
CCNT1O60563 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCNT1O60563 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCNT1O60563 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCNT1O60563 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCNT1O60563 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCNT1O60563 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCNT1O60563 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.86■□□□□ 0.93
CCNT1O60563 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
CCNT1O60563 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCNT1O60563 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
CCNT1O60563 FAM8A6P-201ENST00000407496 1135 ntBASIC20.86■□□□□ 0.93
CCNT1O60563 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.86■□□□□ 0.93
CCNT1O60563 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.86■□□□□ 0.93
CCNT1O60563 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.86■□□□□ 0.93
CCNT1O60563 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC20.86■□□□□ 0.93
CCNT1O60563 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.86■□□□□ 0.93
CCNT1O60563 AC079602.3-201ENST00000623931 403 ntBASIC20.86■□□□□ 0.93
CCNT1O60563 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CCNT1O60563 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
CCNT1O60563 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCNT1O60563 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCNT1O60563 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCNT1O60563 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCNT1O60563 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.86■□□□□ 0.93
CCNT1O60563 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCNT1O60563 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCNT1O60563 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCNT1O60563 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
CCNT1O60563 ESPNP-201ENST00000270691 2015 ntBASIC20.85■□□□□ 0.93
CCNT1O60563 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.85■□□□□ 0.93
CCNT1O60563 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCNT1O60563 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.85■□□□□ 0.93
CCNT1O60563 NEFHP1-201ENST00000412845 2629 ntBASIC20.85■□□□□ 0.93
CCNT1O60563 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.85■□□□□ 0.93
CCNT1O60563 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCNT1O60563 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.85■□□□□ 0.93
CCNT1O60563 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCNT1O60563 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCNT1O60563 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCNT1O60563 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.85■□□□□ 0.93
CCNT1O60563 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCNT1O60563 PVRIG2P-201ENST00000435460 978 ntBASIC20.85■□□□□ 0.93
CCNT1O60563 AC112907.2-201ENST00000448639 330 ntBASIC20.85■□□□□ 0.93
CCNT1O60563 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCNT1O60563 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CCNT1O60563 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCNT1O60563 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCNT1O60563 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCNT1O60563 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCNT1O60563 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CCNT1O60563 GMCL1P1-201ENST00000463439 1581 ntBASIC20.85■□□□□ 0.93
CCNT1O60563 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.84■□□□□ 0.93
CCNT1O60563 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCNT1O60563 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CCNT1O60563 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCNT1O60563 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CCNT1O60563 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CCNT1O60563 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCNT1O60563 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCNT1O60563 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCNT1O60563 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.84■□□□□ 0.93
CCNT1O60563 AC092597.1-201ENST00000487352 616 ntBASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms