Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF6Q9Y252 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF6Q9Y252 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF6Q9Y252 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.36■□□□□ 0.37
RNF6Q9Y252 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RNF6Q9Y252 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF6Q9Y252 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
RNF6Q9Y252 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF6Q9Y252 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF6Q9Y252 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RNF6Q9Y252 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF6Q9Y252 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RNF6Q9Y252 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF6Q9Y252 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF6Q9Y252 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF6Q9Y252 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RNF6Q9Y252 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF6Q9Y252 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF6Q9Y252 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF6Q9Y252 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RNF6Q9Y252 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
RNF6Q9Y252 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF6Q9Y252 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF6Q9Y252 TSPY14P-201ENST00000303979 915 ntBASIC17.35■□□□□ 0.37
RNF6Q9Y252 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF6Q9Y252 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RNF6Q9Y252 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
RNF6Q9Y252 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF6Q9Y252 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF6Q9Y252 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF6Q9Y252 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF6Q9Y252 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
RNF6Q9Y252 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF6Q9Y252 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF6Q9Y252 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF6Q9Y252 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RNF6Q9Y252 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF6Q9Y252 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF6Q9Y252 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RNF6Q9Y252 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RNF6Q9Y252 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF6Q9Y252 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF6Q9Y252 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF6Q9Y252 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF6Q9Y252 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF6Q9Y252 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF6Q9Y252 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RNF6Q9Y252 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF6Q9Y252 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF6Q9Y252 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF6Q9Y252 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF6Q9Y252 AC128688.1-201ENST00000487626 519 ntBASIC17.34■□□□□ 0.37
RNF6Q9Y252 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF6Q9Y252 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF6Q9Y252 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF6Q9Y252 SLC25A1P4-201ENST00000567977 778 ntBASIC17.34■□□□□ 0.37
RNF6Q9Y252 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RNF6Q9Y252 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RNF6Q9Y252 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF6Q9Y252 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF6Q9Y252 AC073592.3-201ENST00000625118 1834 ntBASIC17.34■□□□□ 0.37
RNF6Q9Y252 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF6Q9Y252 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF6Q9Y252 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF6Q9Y252 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF6Q9Y252 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
RNF6Q9Y252 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF6Q9Y252 AC126763.1-201ENST00000552015 2118 ntBASIC17.33■□□□□ 0.37
RNF6Q9Y252 AC008764.6-201ENST00000595909 2069 ntBASIC17.33■□□□□ 0.37
RNF6Q9Y252 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
RNF6Q9Y252 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF6Q9Y252 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.33■□□□□ 0.37
RNF6Q9Y252 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF6Q9Y252 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF6Q9Y252 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF6Q9Y252 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF6Q9Y252 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RNF6Q9Y252 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF6Q9Y252 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
RNF6Q9Y252 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF6Q9Y252 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF6Q9Y252 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF6Q9Y252 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RNF6Q9Y252 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF6Q9Y252 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF6Q9Y252 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF6Q9Y252 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF6Q9Y252 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF6Q9Y252 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
RNF6Q9Y252 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF6Q9Y252 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF6Q9Y252 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RNF6Q9Y252 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF6Q9Y252 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF6Q9Y252 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF6Q9Y252 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF6Q9Y252 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF6Q9Y252 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF6Q9Y252 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF6Q9Y252 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms