Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 AC005521.1-201ENST00000393351 872 ntBASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 LIN28AP1-201ENST00000429574 405 ntBASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 AC141257.4-201ENST00000634557 245 ntBASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 AC136944.6-201ENST00000634818 245 ntBASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 AC092865.7-201ENST00000641832 219 ntBASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 AL357033.4-201ENST00000617703 1807 ntBASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 AC020916.1-201ENST00000587762 1774 ntBASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGCLL1Q8TB92 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
HMGCLL1Q8TB92 HOXB1-202ENST00000577092 1414 ntBASIC18.06■□□□□ 0.48
HMGCLL1Q8TB92 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLL1Q8TB92 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLL1Q8TB92 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLL1Q8TB92 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLL1Q8TB92 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
HMGCLL1Q8TB92 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLL1Q8TB92 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLL1Q8TB92 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLL1Q8TB92 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLL1Q8TB92 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLL1Q8TB92 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HMGCLL1Q8TB92 AP000523.1-201ENST00000398242 1049 ntBASIC18.06■□□□□ 0.48
HMGCLL1Q8TB92 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.06■□□□□ 0.48
HMGCLL1Q8TB92 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.06■□□□□ 0.48
HMGCLL1Q8TB92 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLL1Q8TB92 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLL1Q8TB92 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLL1Q8TB92 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLL1Q8TB92 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLL1Q8TB92 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLL1Q8TB92 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLL1Q8TB92 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGCLL1Q8TB92 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 AC034236.2-201ENST00000606662 1610 ntBASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 BX664615.1-201ENST00000443558 458 ntBASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 ATP5G1P1-201ENST00000448724 379 ntBASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGCLL1Q8TB92 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCLL1Q8TB92 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCLL1Q8TB92 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
HMGCLL1Q8TB92 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCLL1Q8TB92 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.04■□□□□ 0.48
HMGCLL1Q8TB92 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCLL1Q8TB92 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCLL1Q8TB92 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCLL1Q8TB92 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
HMGCLL1Q8TB92 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.04■□□□□ 0.48
HMGCLL1Q8TB92 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCLL1Q8TB92 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.04■□□□□ 0.48
HMGCLL1Q8TB92 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCLL1Q8TB92 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCLL1Q8TB92 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCLL1Q8TB92 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGCLL1Q8TB92 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.04■□□□□ 0.48
HMGCLL1Q8TB92 RCN1P1-201ENST00000400413 996 ntBASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms