Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN4Q6PJG9 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN4Q6PJG9 AL357033.4-201ENST00000617703 1807 ntBASIC16.59■□□□□ 0.25
LRFN4Q6PJG9 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN4Q6PJG9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN4Q6PJG9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LRFN4Q6PJG9 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.59■□□□□ 0.25
LRFN4Q6PJG9 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN4Q6PJG9 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.59■□□□□ 0.25
LRFN4Q6PJG9 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN4Q6PJG9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.59■□□□□ 0.25
LRFN4Q6PJG9 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN4Q6PJG9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN4Q6PJG9 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN4Q6PJG9 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
LRFN4Q6PJG9 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LRFN4Q6PJG9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN4Q6PJG9 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN4Q6PJG9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.59■□□□□ 0.25
LRFN4Q6PJG9 AL109659.2-201ENST00000606809 1674 ntBASIC16.59■□□□□ 0.25
LRFN4Q6PJG9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRFN4Q6PJG9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.59■□□□□ 0.25
LRFN4Q6PJG9 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRFN4Q6PJG9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.58■□□□□ 0.25
LRFN4Q6PJG9 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.58■□□□□ 0.25
LRFN4Q6PJG9 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
LRFN4Q6PJG9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.58■□□□□ 0.25
LRFN4Q6PJG9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
LRFN4Q6PJG9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
LRFN4Q6PJG9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.58■□□□□ 0.25
LRFN4Q6PJG9 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.58■□□□□ 0.25
LRFN4Q6PJG9 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LRFN4Q6PJG9 AC018470.1-201ENST00000624790 3129 ntBASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 AL023284.2-201ENST00000405850 579 ntBASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 SLC25A1P2-201ENST00000430693 912 ntBASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 GPAT2P1-201ENST00000444924 1672 ntBASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 AC008556.1-201ENST00000610908 2040 ntBASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LRFN4Q6PJG9 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 AC135050.7-201ENST00000624508 2218 ntBASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 AL353719.1-201ENST00000566847 864 ntBASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 AL390961.4-201ENST00000623958 2535 ntBASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LRFN4Q6PJG9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LRFN4Q6PJG9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms